Gene Tpau_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1241 
Symbol 
ID9155382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1274310 
End bp1275365 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID 
ProductMammalian cell entry related domain protein 
Protein accessionYP_003646211 
Protein GI296138968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTC CGACGAAGAG GTCCGCCCTG CGGGCCGCCC GGACCGGGGT GATCACGGTG 
ACCGCCGGGG CGATGCTGAC CGGTTGTGCC GGCATGTTCA ATCCGTCCTC GATCCCCGCC
CCCGGTCAGC CGGGCGGCGG CTCGGGGTAC ACGGTCCACC TCGACTTCAC CAACGTCCTG
AACCTGCCCG ATAAGGCGCG CGTGGTGTTC GACGGCGTCA ACTCGGGCCG ACTGCAGAAG
GTGACCCTGC AGGAGGGCAA GGCCGTCGTC GACGTCAAGA TCAACGACGG CGTGCAGGTT
CCGAACACCG TCATGGCGAC GCTGCAGCAG GACACGATCC TCGGCGACAC CTATGTGGCG
CTGAAGTCCA CGCCGGGCAA GCCGGGATCG CCGCTCAAGC CGGGCGATAC GGTTCCGCTG
TCGCAGACCA AGCCGCCGAC GCAGATCGAG GACATCCTGC GCGATCTGGC GAACTTCCTC
GGTAGCGGCA GCCTGATGCA GCTCCAGGAC ACGTTCAAGC GGATCAACGA CAACCTGCCT
GCCGATCCGC AGCAGCTCTC CGGCGTGATC AAGACGGTCT CGCAGTCCGT GGTCGATCTG
GGCCAGCAGA GCGACAACGT GAGCCAGTCG ATCACCTCCG TCGCCAGCCT GGTGAACACG
GTGAACTCGA ACGACGATCT GCTGGTCGCG CTGCTCAAGC CCTCGGATGA TTGGCTGGGT
GACTCGCTGA GCCTGACCAC CGGCGCCATC AAGGTGCTCA GCCGACTGTC CGATGCGCTC
GCTCCCCTGA GCTTCACGCA GCCGCTGCTG AACACCTCGA CCGCGGTCGT GGCCGGGGTG
ATCAAGCCGC TCATGTTCCC CGGCTGGCCG AACATGAACG GCCGTCAGGC GAACCTCGCG
AACCTCGAGG ACCTGCTCAA GAACAAGATC CTGCCCTTCC TCGCCAGCGG CGCGAAGGTC
AACGTCAAGG AGATGGGCGC TAACGGCGGA GTCCCCAACG CCGAGGTCGC CCAGCAGACG
GTCAAGAACC TTCGGATGGT GGGAGCAGTT CCGTGA
 
Protein sequence
MRIPTKRSAL RAARTGVITV TAGAMLTGCA GMFNPSSIPA PGQPGGGSGY TVHLDFTNVL 
NLPDKARVVF DGVNSGRLQK VTLQEGKAVV DVKINDGVQV PNTVMATLQQ DTILGDTYVA
LKSTPGKPGS PLKPGDTVPL SQTKPPTQIE DILRDLANFL GSGSLMQLQD TFKRINDNLP
ADPQQLSGVI KTVSQSVVDL GQQSDNVSQS ITSVASLVNT VNSNDDLLVA LLKPSDDWLG
DSLSLTTGAI KVLSRLSDAL APLSFTQPLL NTSTAVVAGV IKPLMFPGWP NMNGRQANLA
NLEDLLKNKI LPFLASGAKV NVKEMGANGG VPNAEVAQQT VKNLRMVGAV P