Gene Tpau_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1239 
Symbol 
ID9155380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1272429 
End bp1273280 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646209 
Protein GI296138966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAGA ACGCCCCGGA CGACAAGACC CCGGCTGCCG AGGACGCGGT CGACGAGAGC 
GCCGCGGAGG CCGCGACTAC CGCCGACGAG GCCGAGGACG CGGTGGCCGA AACGGCACCG
TCGACACCCG CAGCGAAGCC CGCCGCGACG ACGAAGCCGA AGCCCGCCCC TGCGGGCGAT
GAGGACGAGG AGGAGACGGA GGTCGTCCCC GTCACCCGGC GGCGTCCGCC GCGACCGGCG
ACCGCCACCG CCCCGTCGGC GCCGAGCACG CCCGCGACCG TCGCCGTCAC CGTGCTGGTG
ATCGCTCTGG TCGCGGCGAC CACGATCTTC GGCTTCCTGT ACTTCAAGAC TCGCGGCGAG
CTGAACGATC AGAAGGCCGC CGATGCCGAT CGTGCTCATG CGGAGAAGGT CGCCACCGAT
TACGCGACCG GCGCGTCCAC GTTCGACTAC CGCGACCTGG GCCCGTGGAG CAAACGCCTC
ACCACCGGTG TCTCGACCGA GCTCAAGCAG CGCTTCGAGC CCACGGTCGG TGCGATGAAC
CAGCTGCTGC AGCCCTTGCA GTGGGTCTCG AAGGGCACCG TCACCGATGC CGTGGTCAGC
TCGCAGTCGG GCTCGATCTA CAAGGTCAAC GCCTACGTCA ACGTCGATAT GACCAACGCT
CAGGTCCCTT CCGGCCGTAC CACGTTGACC GTGTACAACG TCACGATCAA CAAGGATGCG
AACTGGGAGA TCACCGATGT CGGTGGCACC GGGGCCGCGC CCGGGATCCA GTCCAACGAG
CAGACCCCCG CTCCGGCGCC CGCGCCCACC GAGACGGCGC CGGCACCCGC GCCGGCCGGT
CCCGGCAACT GA
 
Protein sequence
MTENAPDDKT PAAEDAVDES AAEAATTADE AEDAVAETAP STPAAKPAAT TKPKPAPAGD 
EDEEETEVVP VTRRRPPRPA TATAPSAPST PATVAVTVLV IALVAATTIF GFLYFKTRGE
LNDQKAADAD RAHAEKVATD YATGASTFDY RDLGPWSKRL TTGVSTELKQ RFEPTVGAMN
QLLQPLQWVS KGTVTDAVVS SQSGSIYKVN AYVNVDMTNA QVPSGRTTLT VYNVTINKDA
NWEITDVGGT GAAPGIQSNE QTPAPAPAPT ETAPAPAPAG PGN