Gene Tpau_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1238 
Symbol 
ID9155379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1271708 
End bp1272358 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_003646208 
Protein GI296138965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCATCG CGTACGACTG CACCGACCCC GACTCCCGGT CCGCCGGCAT CGCCGCGGCG 
AGAGCCGCGC TCAAGGGTGG CCACCTCGTG GTGATGCCGA CCGACACGCT GTACGGCATC 
GGCTGCGACG CCTTCGACAA CCGCGCGGTC GGCGATCTCC TCGCCGCCAA GCACCGGGGC 
CCCGATATGC CGGTGGGAGT GCTCGTGGGC TCGTGGGACA CCATCGACGG CCTCGTCAGC 
CGGGTCAGCC CCGCCGCCCG CGAGCTGACC CACGCGTTCT GGCCCGGAGC CGTGTCCCTG 
GTCGTCGAGC AGGCGCCCAG CCTCGCGTGG AACCTGGGTG ATACCCGCGG CACCGTCATG 
CTGCGCATGC CGCTGCATCC GGTCGCCATC GAGCTGCTCC GTGAGGTCGG CCCGATGGCC 
GTCTCCAGTG CCAACGTCTC GGGCAAGCCC CCGGCCGCCA CCATGACCGA CGCCCGCGAT 
CAGCTCGGTG ACTCGGTGGA GGTCTACCTC GACGGTGGGC CGGCCGAGCA TGCGGTCGCG 
TCGACCATCG TCGACCTGTC CGGCCCGCAG CCGCGGGTGC TCCGCGAGGG GGCGGTCACC 
AGCGCCCGGA TCGCCGAGGT ACTCGGCGTC GACGCGCAGT CCCTGGCCTA A
 
Protein sequence
MSIAYDCTDP DSRSAGIAAA RAALKGGHLV VMPTDTLYGI GCDAFDNRAV GDLLAAKHRG 
PDMPVGVLVG SWDTIDGLVS RVSPAARELT HAFWPGAVSL VVEQAPSLAW NLGDTRGTVM 
LRMPLHPVAI ELLREVGPMA VSSANVSGKP PAATMTDARD QLGDSVEVYL DGGPAEHAVA 
STIVDLSGPQ PRVLREGAVT SARIAEVLGV DAQSLA