| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1229 |
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| Symbol | |
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| ID | 9155370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1260483 |
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| End bp | 1261844 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003646199 |
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| Protein GI | 296138956 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.972871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAAC TCGCTCCCGG CGTCTGGCCG ACGCACGCGC GCCGCGAGGC CGATGGTGGC
GTCAGCGTGG CCGGCGTCTC CGCTCGCGCC CTTGCCGAGG AATTCGGCAC CCCGCTGTTC
GTGATCGACG AGGACGACTT CCGCGACCGG TGCCGCGCCA TGCGCGACGC CTTCGGCGAC
GACGCGGCCG TGCATTACGC CTCGAAGGCG TTCCTCTCGA TGGAGATCGC CCGCTGGGTG
CGCGACGAGG GACTGAACCT GGACGTGTGC AGCGGCGGCG AGCTCGCCAT CGCGCTGCGC
GCCGGCTTCC CCGCCGACCG GATCGCGCTG CACGGCAACA ACAAGTCGGT CGCCGAGCTG
GATTACGCAG TGGCGTCGGG TATCGGGCAC ATCGTGATCG ACTCGCTCTC CGAGATCGCC
CGGCTCGACG CGATCGCGGG GGAGCGTGGC AGTGTCCAGG ACGTGCTGAT CCGGCTGACC
CCCGGCGTTG AGGCGCACAC CCACGAGTTC ATCTCCACCG CCCACGAGGA CCAGAAGTTC
GGCTTCTCCC TCGCATCGAA CGAGGGCGAC TCACCAGCGA TGCGCGCCGT CACCGCGGTC
TTCGAGGCCG ACAACATCCG GCTCGTGGGC CTGCACAGCC ACATCGGCTC ACAGATCTTC
GATGTGGACG GCTTCGAGAT CGCCGCCCGT CGAGTGCTGG AGCTGCTGCG CGACATCGTG
ACTCGCTTCG GCGCAGAGAA GACCGCCCAA CTGAACACGA TCGACCTCGG GGGCGGCCTG
GGGATCGCCT ATACCGCCGC CGATGATCCG CCCCCGGTCG CCGATCTCGC CGCGAAGCTC
CGGAACATCG TCGAGACCGA ATCTGCCGCA CTGGGATTGC AGACACCGCA CCTCGCCGTC
GAGCCCGGCC GTGCCATCGC CGGTCCGCCC GGCATCACCC TGTACGAGGT GGGCACGATC
AAGGACGTCG TCCTGGACGG CAAGGACGAG CGTGATCCGG CCTTCCGCCG GTACGTCTCC
GTAGACGGCG GCATGAGCGA CAACATCCGC CCGGCGCTGT ACGGCGCCGA GTACACGGTC
GCCATCGCCG ACCGCGACCC CGAAGGTGCA CCGGTTCCCT CGCGCATCGT CGGCAAGCAC
TGCGAGACCG GCGATATCCT GGTGCGTGAC ACCACGACCC CCGACGGCCT GGCCGAGGGC
GACTTGCTCG CCGTGGCCGC CACCGGGGCC TACTGCTATT CGATGTCCAG CCGCTACAAC
ATGCAGCCGC GACCGGCTGT CGTCGCGGTC AAGGACGGCG CGGCGCGGCT GATCCTGCGC
CGGGAGACCG TGGACGACCT GGTGAGCCTG GAGGTGCTCT GA
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| Protein sequence | MSELAPGVWP THARREADGG VSVAGVSARA LAEEFGTPLF VIDEDDFRDR CRAMRDAFGD
DAAVHYASKA FLSMEIARWV RDEGLNLDVC SGGELAIALR AGFPADRIAL HGNNKSVAEL
DYAVASGIGH IVIDSLSEIA RLDAIAGERG SVQDVLIRLT PGVEAHTHEF ISTAHEDQKF
GFSLASNEGD SPAMRAVTAV FEADNIRLVG LHSHIGSQIF DVDGFEIAAR RVLELLRDIV
TRFGAEKTAQ LNTIDLGGGL GIAYTAADDP PPVADLAAKL RNIVETESAA LGLQTPHLAV
EPGRAIAGPP GITLYEVGTI KDVVLDGKDE RDPAFRRYVS VDGGMSDNIR PALYGAEYTV
AIADRDPEGA PVPSRIVGKH CETGDILVRD TTTPDGLAEG DLLAVAATGA YCYSMSSRYN
MQPRPAVVAV KDGAARLILR RETVDDLVSL EVL
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