Gene Tpau_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1228 
Symbol 
ID9155369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1258818 
End bp1260470 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content68% 
IMG OID 
Productarginyl-tRNA synthetase 
Protein accessionYP_003646198 
Protein GI296138955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCCCG CTGACCTTTC GGAACTCCTG CATGCGACCG CGACGACCGT GCTCACCGAG 
CGCGGCCTCG ACGTCTCGGT GCTGCCCGAA CGCGTCACCG TCGAGCGCCC GCGCAACCCC
GAGCACGGCG ACTACGCCAC CAATCTTGCG ATGCAGGTCG CGAAGAAGGC GGGGGTGAAC
CCGCGCGACC TCGCGACCTG GCTCGCTGAG GCCCTGGCCA GCGCGGACGG TATCGACGAG
GCGACGATCG CGGGCCCCGG CTTCCTCAAC ATCCGCCTGG CGGCGGACGC GCAGAATCAG
CTCGTCGTGA GCATTCTGGA GCAGAAGGAC GCCTTCGGGC ACGGCAGCAC ACTCGCGGAC
CAGGTGATCA ACCTCGAGTT CGTCTCCGCC AACCCCACCG GCCCCGTGCA CCTCGGTGGC
GCTCGCTGGG CCGCTGTCGG CGACAGTCTG GGCCGCGTCT TGGAGGCGCA GGGCGCCGAG
GTCACCCGCG AGTACTACTT CAACGATCAC GGCGCGCAGA TCGACCGGTT CGCTCGCTCG
CTCGACGCCG CCGCCACCGG CAAACCCACG CCCGACGACG GCTACGCCGG CGACTACATC
GGCGAGATCG CGGCCACCGT CGTGCAGAAC CATCCGGGCA TTCTGGATCT GCCCGACGCC
GAGCGTGTCG AAGCCTTCCG GGCCGACGGC GTAGAGCTGA TGTTCGACCA CATCAAGCGC
ACCCTGCACG AGTTCGGCAC CGACTTCGCC GTGTTCACCC ACGAGGACGA GATGTTCTCC
TCGGGTCTCG TCGAGCAGAG CGTCGACCAG CTCAAGGCGC AGGGCAATCT GTACGAGAAG
GACGGAGCGT GGTGGCTCAA GTCCACCGAT TTCGGTGACG ACAAGGACCG CGTGGTCATC
AAGTCGGACG GTAACGCCGC CTACATCGCC GGCGACATCG CCTACCTCAA GCACAAGTTC
GACCGGGGCT TCACCCTGGC GATCTACATG TTGGGCGCCG ACCATCACGG CTACATCGGC
CGGCTCAAGG CCGCCGCCGC GGCCATGGGC TACGACCCGG CCCGGGTCGA GGTGCTGATC
GGCCAGCTGG TAAACCTGGT CAAGGACGGC AAGCCCGTGC GGATGAGCAA GCGGGCCGGC
ACGGTCATCA CCCTCGATGA TCTGGTCGAT GCCGTGGGTG TGGACGCGGC GCGGTACTCG
CTGATCCGCA GCTCGGTGGA CACGTCCATC GACCTCGACC TGGACCTGCT GACTCAGGCC
AGCAACGAGA ACCCCGTGTA CTACGTGCAA TACGCGCACG CTCGGCTGTC CGCGATCGCT
CGCTCGGCCG CCGAGCTGGG CATTGAGGGT TCGACGGAAC ACCTTGGCCT GCTGGACAAC
CCGCGCGAAG GTGACCTGGT GCGCACTCTG GGTGAGTTCC CGGGCGTCGC GGCCGCCGCC
GCTTCGCTGC GTGAGCCGCA CCGCGTGGCC CGCTACCTCG AGGAGCTGGC GGGGGCGTAC
CACCGCTTCT ACAGCGAGTG TCGCGTGCTT CCCCTCGGCG ACGAGGAGCC CACCGATCTG
CACCGCGCCC GGGTGGCGCT GTGCGCCGCC ACCCGCCAGG TGCTCGCCAA CGGCCTGTCC
CTCGTGGGCG TTTCGGCGCC CGACCGGATG TGA
 
Protein sequence
MTPADLSELL HATATTVLTE RGLDVSVLPE RVTVERPRNP EHGDYATNLA MQVAKKAGVN 
PRDLATWLAE ALASADGIDE ATIAGPGFLN IRLAADAQNQ LVVSILEQKD AFGHGSTLAD
QVINLEFVSA NPTGPVHLGG ARWAAVGDSL GRVLEAQGAE VTREYYFNDH GAQIDRFARS
LDAAATGKPT PDDGYAGDYI GEIAATVVQN HPGILDLPDA ERVEAFRADG VELMFDHIKR
TLHEFGTDFA VFTHEDEMFS SGLVEQSVDQ LKAQGNLYEK DGAWWLKSTD FGDDKDRVVI
KSDGNAAYIA GDIAYLKHKF DRGFTLAIYM LGADHHGYIG RLKAAAAAMG YDPARVEVLI
GQLVNLVKDG KPVRMSKRAG TVITLDDLVD AVGVDAARYS LIRSSVDTSI DLDLDLLTQA
SNENPVYYVQ YAHARLSAIA RSAAELGIEG STEHLGLLDN PREGDLVRTL GEFPGVAAAA
ASLREPHRVA RYLEELAGAY HRFYSECRVL PLGDEEPTDL HRARVALCAA TRQVLANGLS
LVGVSAPDRM