| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1215 |
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| Symbol | |
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| ID | 9155355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1241873 |
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| End bp | 1244749 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | SNF2-related protein |
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| Protein accession | YP_003646185 |
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| Protein GI | 296138942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.559784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCGTC CCCGGTCCGC CGCGCACGGG CTCTGGCGGC CCGGACTCGG GCTGGCGCTG
TGGTTCACCG ACGACCTCGG TGAGCCGACC GCCGAACCCG ACCCGGCCGT CATGCCTGCG
CCCGTCGCCG CAGTCCTCGG TGACCGCAAG CCCCGCCGAT CCACCACGGT GCCGGGGCCG
GGCGGACAGC TCGTCGCGCC GGTCCTGACT CTGGGGCCCG AACGTGCCGC CGCGCTGCTC
GACCGGCTGG GCCCCGACGA CGGCGCCGGC GATCTGCGGT ACCTGCGCTG GGTGGCGAAG
TCGATCGAAC GGTTCGTCGC GGTCGGGGCC GTGACCCCGG TGCTGCGCAG CGACGACGGC
GATTGGCTCG TGCGGTGGGC GCCGCTGGAG TCCGTGCAGT GGCGTACCTG GGTGCAGACG
GCAGCCGCCG CGATGCCCGC CGCGTTGCGT CGCGGCGGCG ATCTGGCCGC GACCCTCGAT
ATGGCCGCCG AACTCACCGA TCGCTACGCG CGCAACCGCC TCGGCGACGG GCCGTGGGAA
TGGGTGGCCG CGCCCTCGCT GCGGGCACTG GTCGACGGTG AGCCACTGCC CCCGGGCGAG
GTCTCCGATG CGGGCGCCCC CGCCGCGTGG ACCGAATGGT CGGGCAGCGT CCGCTCGGCC
GAGACGCTGC TGGTGCTGCG GCTCATCGAG CCCGATGGTA AGCGGCCCGG CGAGATCGAT
CCGGTCGCCG CCCCACCGGA TGCGCCGTGG CGGTTGGAGG TGTGCCGCCG GGTGCCCGGC
GCCGCACCCG TGCGTGCCGA TCCGGTGCGG ATGAGTCCCG TCGACCTCGA TGACCTGGCG
AGCGAACTGG CACGGGCACT GGCGGTGTAC CCGCCCCTGA AACGAGTGCG TCAGGATCGC
GGCTCACTGG ATTTCCTGCT CACCACCGAG GAAGCGGAAG CGCTGTTCCT CGAGGGTGCT
CCGGGATTGA CCAAGGCGGG CTACGAGGTG CTGCTCCCCA CCTCGATCGC CACGGTCCGG
CCCGCGTTGC GACTCGCCGG CCGGGAGCAG CCGGGCCGCA CCGCACTCAC CGTGCAGGCC
GGTCTCGCCG AGATCAAGGA CTTCGCCTGG CAACTCGCGG TGGGCGATGC GGTGCTCACC
GCGAGTGAGC TGGCCGGGCT GGCCAACACC ATGTCGGGAT TGGTGAAGGT ACGCGGCCGG
TGGGTCCGTG CGGACCGTCG CACCCTGGCG CAGGCGGCAC GGTTCGTCGG CGAACAGCGC
CGGGCCAAGG AGGACGGCAC CGCCCACGAC CTCGGCGATC TGCTCGGGCT GATCGCCGAC
CCCGCCGCGC TGCCCGCGCC ACTGGTCGCG GTCGACGGCC TCGGCTGGCT CGACTCGGTG
TACCGGGGCG GCACCATCGC GCCCGCGTCG GTGGCCCCGC CGTCGGGCCT GAAGGCGCAA
CTGCGTCCGT ATCAGTTGCG CGGACTCGAA TGGCTGGTCA CCTTGTGGCG CAGTGGGATC
GGGGCGGTAC TCGCAGACGA TATGGGGTTG GGCAAGACGA TCCAAGTGTT GGCGCTGCTA
TGCCACGAGC GCGAGGCGGG CCCCGTCGAT CCCACACTGA TCGTGTGCCC GATGTCGGTG
GTGGGGAACT GGGCCGCCGA GGCACAGCGG TTCGCGCCGG ACCTGCGCGT GCTGGTGCAC
CACGGCGCCG ATCGCGCGGC CGGTGCGGCC TTCGCGGAGG CGGTGGCCGG CGCCGACATC
GTGATCACCA CGTTCGCGCT CGCCTCGCGG GACCGGGAGC AGCTCTCGGC GCTGCGCTGG
GGCCGCATCG TGGTCGATGA AGCACAGCAC GTGAAGAACG TGAACACCGC TGCGGCGAAG
GCGCTTCGGG CGATTCCCGC GGCGCACCGG GTGGCACTCA CCGGCACTCC GGTCGAGAAC
CGGCTCGAGG ACCTGCGTGC CGTGATCGAC CTGGTCAATC CGGGCCTGCT CGGATCGGCG
CGCACCTTCC GGAACCGGTT CGCGATGCCC ATCGAACGCG AACAGGACCG GGCCGCCGCG
CGGCGCCTCA CCACGCTCAC CTCACCGTTC ATCCTGCGCC GGGTGAAGAC CGATCCCGCT
ATCGCGCCCG AGCTGCCGGA GAAGGCGGAG TTCACGATCC GCGCCTCGCT CACTCCCGAG
CAGGCAGGCC TGTACCAAGC GGTGCTGAAC CGGTTGGTGG AGGAGCTACG CCGGTCGGAG
GGGATGCCGC GCCGTGGTCT CGTCCTCGCC TCGCTCACTC GGCTCAAACA GGTGTGCAAC
CACCCCGCGC AGTACCTCGA CGACGGTTCG CCGCTGCTGC GCCGCGGGCA GCACCGCTCC
GGCAAGGTCG AACTGCTCGC CGACATCCTG GAGACCGTGG CCGCCGATGG TGAGCGGGCG
CTGGTATTCA CCCAGTACGC CGAGTTCGCC CGGATGCTGC AGCCGTGGCT CAGCGGGCTC
CTCGGCGCCG AGGTGCCGGT ACTCGACGGT TCCGTACCGC GTCGTGACCG GGATGCGATG
GTCGAGCGGT TCCAGGCCGG CGACGGTGCG CCCGTGCTCC TGGCCACCGT GAAATCGGGT
GGCACCGGGC TCAACCTGAC GGCCGCGAAT CATGTGGTGC ACGTGGATCG CTGGTGGAAT
CCCGCGGTCG AGAACCAGGC CACGGACCGG GCCTTCCGGA TCGGGCAGAC GAAGGCGGTG
CAGGTGCGCA AGTTCGTGTG TGCGGGAACG CTGGAGGAGC GGATCGACGG GGTGATCGCC
GCCAAGCGGG AACTGTCGGA CATGACGGTG CAGGTGGGCG AGGCCTGGCT CACCGAGCTG
AACAACGATG AGCTGTACGA GCTGATCGCC CTGCGCGAGG ACGCGGTGGC CCGCTGA
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| Protein sequence | MPRPRSAAHG LWRPGLGLAL WFTDDLGEPT AEPDPAVMPA PVAAVLGDRK PRRSTTVPGP
GGQLVAPVLT LGPERAAALL DRLGPDDGAG DLRYLRWVAK SIERFVAVGA VTPVLRSDDG
DWLVRWAPLE SVQWRTWVQT AAAAMPAALR RGGDLAATLD MAAELTDRYA RNRLGDGPWE
WVAAPSLRAL VDGEPLPPGE VSDAGAPAAW TEWSGSVRSA ETLLVLRLIE PDGKRPGEID
PVAAPPDAPW RLEVCRRVPG AAPVRADPVR MSPVDLDDLA SELARALAVY PPLKRVRQDR
GSLDFLLTTE EAEALFLEGA PGLTKAGYEV LLPTSIATVR PALRLAGREQ PGRTALTVQA
GLAEIKDFAW QLAVGDAVLT ASELAGLANT MSGLVKVRGR WVRADRRTLA QAARFVGEQR
RAKEDGTAHD LGDLLGLIAD PAALPAPLVA VDGLGWLDSV YRGGTIAPAS VAPPSGLKAQ
LRPYQLRGLE WLVTLWRSGI GAVLADDMGL GKTIQVLALL CHEREAGPVD PTLIVCPMSV
VGNWAAEAQR FAPDLRVLVH HGADRAAGAA FAEAVAGADI VITTFALASR DREQLSALRW
GRIVVDEAQH VKNVNTAAAK ALRAIPAAHR VALTGTPVEN RLEDLRAVID LVNPGLLGSA
RTFRNRFAMP IEREQDRAAA RRLTTLTSPF ILRRVKTDPA IAPELPEKAE FTIRASLTPE
QAGLYQAVLN RLVEELRRSE GMPRRGLVLA SLTRLKQVCN HPAQYLDDGS PLLRRGQHRS
GKVELLADIL ETVAADGERA LVFTQYAEFA RMLQPWLSGL LGAEVPVLDG SVPRRDRDAM
VERFQAGDGA PVLLATVKSG GTGLNLTAAN HVVHVDRWWN PAVENQATDR AFRIGQTKAV
QVRKFVCAGT LEERIDGVIA AKRELSDMTV QVGEAWLTEL NNDELYELIA LREDAVAR
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