Gene Tpau_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1212 
Symbol 
ID9155352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1239904 
End bp1240659 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646182 
Protein GI296138939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0125049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATC AGCCCGCCCC CATCGAGCCC AACGTGCCCG CCACCCGCGA CGGCGGCGGC 
GTCCTGGGCT CTGTCATCGA CCGGGCCGCC CGGCTCCAGG CACCCGCGGT CGCGAAGTAC 
GTCGCGGGCC TGCGCGAGGC GCATCCCGAC GAGAGCCCGG CGCAGATCAT CGGCCGGATC 
GAGAAGCGCT ACCTCCTCAC CGTGACCGGA ACGGGTGGCG CCGCGGGCGC GACCGCGGCG 
GTTCCCGGCG TCGGCACACT GGCGGCGATC GGCACCGTCG GCGCCGAGAC CGTGGTGTTC 
ATGGAGGCCT CGGCCCTGTA CGCCCTGGCC GTGGCGGAGG TCTACGGCAT CTCCCCCGAA 
GATCGCGAGC TGCGCAAGGC CCTGGTGCTG ACCGCGGTGC TGGGCGAGGC GGGGCTCGGT 
GCGCTGCGGG CCACCGTGGG CGCCAAGAAC GCCTCGCTGA TGAACCTCAA GCGCAATCCT 
GCGCAACTTC CCGGCCTCAG CGGCCTGAAC AAGCAGCTGA TGAAGATGTT CAGCCGCCGG 
TTCCTGGCGA AGAAGTCGCC ACTGGTCCTG GGCAAACTCC TCCCCGCGGG CATCGGTGCC 
GTGGTGGGCG CCGGTGGCAA CCGGGTACTG GGCAAGGGCG TGATCAAGAA CTCCCGAAAC 
GCGTTCGGCC CGGTCCCCAC GGCGTGGCCG ACCCCTGGCC TGCGGGTGAT CGACGGATCG 
GCCACGGAGG CGGGCGGTAC GGCGTTACCG GAGTAA
 
Protein sequence
MANQPAPIEP NVPATRDGGG VLGSVIDRAA RLQAPAVAKY VAGLREAHPD ESPAQIIGRI 
EKRYLLTVTG TGGAAGATAA VPGVGTLAAI GTVGAETVVF MEASALYALA VAEVYGISPE 
DRELRKALVL TAVLGEAGLG ALRATVGAKN ASLMNLKRNP AQLPGLSGLN KQLMKMFSRR 
FLAKKSPLVL GKLLPAGIGA VVGAGGNRVL GKGVIKNSRN AFGPVPTAWP TPGLRVIDGS 
ATEAGGTALP E