Gene Tpau_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1210 
Symbol 
ID9155350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1235338 
End bp1235988 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646180 
Protein GI296138937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0313613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGAA AGTCCGTGGC AGCCGCGATG GGGCGTAAGC GCACCCGACT GAGCCCGCAA 
GCGCGGCGGC AGCAATTCAT CGACCTGGGA CTGGCGAGCC TCAAGCACCA GGCGCTGGAA 
CAGGTGTCCA TCGAGGAGAT CGCGAGCCAG GCCGGAGTCT CGGCCGGGTT GCTCTTCCAC 
TACTTCGATT CCAAGCTCGA GTTCCAAGTG GCCCTGGTCG AGGAGCAGGC GCGGATCGTC 
GGCGAGGTGG CGACGCCCGA GAAGAACCCG GAAGACATCG CCGAGGTCAT GCCGATCCTC 
ACAGCCACCC TCGGGACCTA CGTCGACCAC ATCATGCAGA ACCGGCAGTC CCTGCTGCCG 
ATGCTCGCCG GCGTCAGCTG GTCCGAGCCG CGCATCCGGA CCGCGGTGAA GTCGGTGCGC 
GAGCAGATCG TGAACCAGTT CGTCGATCAG GCCGAGGGAA TCGGCATCGA ACGGTCGACC 
CGGTTCGTGC TCGCCGTGCA CGGCTGGATC GCGGTGGTCG AGGAGACCCT GGTGCAGTGG 
CTCGACGAGA ACGCCGGCTT CGCCGACATG ACCCGCGACG AGGTGGTCGA CCATCTCGCC 
ACGATGTTCC TCGGAATGGC AGGCGCCGTC GGGCTCGACA TTCCCGCGTG A
 
Protein sequence
MTRKSVAAAM GRKRTRLSPQ ARRQQFIDLG LASLKHQALE QVSIEEIASQ AGVSAGLLFH 
YFDSKLEFQV ALVEEQARIV GEVATPEKNP EDIAEVMPIL TATLGTYVDH IMQNRQSLLP 
MLAGVSWSEP RIRTAVKSVR EQIVNQFVDQ AEGIGIERST RFVLAVHGWI AVVEETLVQW 
LDENAGFADM TRDEVVDHLA TMFLGMAGAV GLDIPA