Gene Tpau_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1194 
Symbol 
ID9155334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1220352 
End bp1220879 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID 
Productprotein of unknown function DUF1003 
Protein accessionYP_003646164 
Protein GI296138921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.753694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC GCTCCCGGCT CGATACGCCG CGGCTCAATC GCAGCATCGG TCTCAACCTC 
GGCGAGGACA TGATCGGCCA GGGCGCCGAG CGCGTCGCCC GATTCCTCGG TACCGGAAGG 
TATCTCGCGA TCCAGACGGT GATCGTGGTG GTATGGATCG CGATCAACGT CAGCTGGGTG 
GCGTTCCGAT TCGATCCGTA TCCGTTCATC CTGCTCAACC TGGCCTTCTC GACCCAGGCC 
GCGTATGCGG CACCGCTGAT CCTGCTGGCC CAGAACCGGC AGGAGAGCCG CGACCGGGTC 
TCGCTCGACG AGGACCGGAT GCGCGCAGCA CAGACTAAGG CGGATACCGA ATTCCTTGCC 
CGCGAACTCG CTTCGGTACG ACTGGCCGTC GGCGAGGCCG CCAGCCGCGA TTACATCCGC 
CGCGAACTCG ACGACGTGCA CGAGAAGCTC GATGCACTGA CGGCCCTGCT GCAATCGCTG 
GAGCATTCGC AGCACAAGCC GAAGGAGAAG TCCCATGCGC CAGACTGA
 
Protein sequence
MTDRSRLDTP RLNRSIGLNL GEDMIGQGAE RVARFLGTGR YLAIQTVIVV VWIAINVSWV 
AFRFDPYPFI LLNLAFSTQA AYAAPLILLA QNRQESRDRV SLDEDRMRAA QTKADTEFLA 
RELASVRLAV GEAASRDYIR RELDDVHEKL DALTALLQSL EHSQHKPKEK SHAPD