| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1191 |
|---|
| Symbol | |
|---|
| ID | 9155331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1216456 |
|---|
| End bp | 1217955 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003646161 |
|---|
| Protein GI | 296138918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACC CGCTGCTGCG CACCAAAACG GTGGAGCAGT CCATCGCCGA TACCGAAGTC
GTCGGCACCC GCTTGAAGAA GCAGCTCACC GCCTGGGATC TGACGATCTT CGGGGTCGCG
GTCGTCGTCG GCGCGGGCAT CTTCACGGTC GGTGCCTCGA CCGCCGGCGA TTTCGCCGGA
CCCGCGGTCT CCGTGTCGTT CGTGATCGCG GCCGTCGCAT GCGGGCTCGC CGCACTCTGC
TATGCCGAGT TCGCGTCCAC GCTCCCGGTG GCAGGCTCGG CCTACACATT CTCGTACGCC
ACCTTCGGCG AATTCGCCGC TTGGATCATC GGCTGGGACC TGGTTCTGGA GTTCTCCATC
GCTGCGGCTG CCGTCGCGAG CGGGTGGTCG AGCTACGTGG GCACCGTGTT CGGGACCGCG
GCACCGGTCG TGGAGATCGG TGGTGTCCGG GTGGACTGGG GCGCGATGCT CATCGTCGCG
GTGCTGACGG TGCTGCTGAC CTTCGGCGCC AAGGTCTCCT CCCGCGTCTC CGCAGTGATC
ACCGCGATCA AGGTGGCCGT GGTGCTGCTC GTCATCGTGG TGGGCGCCTT CTACATCAAG
GGCTCCAACT ACAGCCCGTT CGTCCCCGAG TCGGTTCCCG GTGAGAGCAG CGGGGCTTCC
TGGTCATCGA CGCTGTTCCA GGTGATCAGC GGCGGATCGG GGTCGACCTA CGGCTGGTAC
GGCGTGCTCG CAGGCGCGTC GATCGTGTTC TTCGCGTTCA TCGGCTTCGA CATCGTCGCC
ACCTCCGCGG AGGAGACTCT GCGTCCGCAG CGTGACGTGC CGCGCGGCAT TCTCGGGTCG
CTGGCGATCG TCACCGTGTT GTACATCGCC GTCACCGTGG TGGTGACCGG TATGGCGAGC
TACAAGGATC TGGCGACCAG CGCGGGCAAC GGCAAGGAGA AGAACCTCGC CTACGCGTTC
TCCCTGAACG GGGTCGATTG GGCCGCGACG ATCATCTCGA TCGGCGCTTT GGCCGGCCTG
ACCACCGTGG TGATGGTCCT GCTGATGGGC CAGAACCGCG TCCTGTTCGC CATGGCCCGG
GACGGCCTGC TGCCGCGCCA GCTGGCCAAG ACCTCCGATC GAGGTGTCCC GGTGCGGATC
TCCGTCGGCG TCGGCGTCGT GGTCGCGGTC TTCGCCGGTC TTGTGCCGCT GAGCGAGCTG
GCCTCGCTGA TCAACATCGG CACCCTATTC GCGTTCGTGC TCGTGTCGAT CGGCGTGATC
GTGCTCCGGA AACAGCGCCC GGACCTCAAG CGCGGATTCC GTGCCCCGCT CGTACCTCTG
GTGCCGATCC TCTCTGTGCT CGCCTGCGGC TGGCTGATGC TCAACCTGTC GTTGGAGACG
TGGTTCCGGT TCGTGGTGTG GATGGCGCTC GGCGTGATCG TCTACTTCGT CTACTCGAAG
AACCACTCGG TGCTGGGCCG CCGCGAGCGA GGCGAGGTCA TCGAGTCGCT GGCCGACTGA
|
|---|
| Protein sequence | MSNPLLRTKT VEQSIADTEV VGTRLKKQLT AWDLTIFGVA VVVGAGIFTV GASTAGDFAG
PAVSVSFVIA AVACGLAALC YAEFASTLPV AGSAYTFSYA TFGEFAAWII GWDLVLEFSI
AAAAVASGWS SYVGTVFGTA APVVEIGGVR VDWGAMLIVA VLTVLLTFGA KVSSRVSAVI
TAIKVAVVLL VIVVGAFYIK GSNYSPFVPE SVPGESSGAS WSSTLFQVIS GGSGSTYGWY
GVLAGASIVF FAFIGFDIVA TSAEETLRPQ RDVPRGILGS LAIVTVLYIA VTVVVTGMAS
YKDLATSAGN GKEKNLAYAF SLNGVDWAAT IISIGALAGL TTVVMVLLMG QNRVLFAMAR
DGLLPRQLAK TSDRGVPVRI SVGVGVVVAV FAGLVPLSEL ASLINIGTLF AFVLVSIGVI
VLRKQRPDLK RGFRAPLVPL VPILSVLACG WLMLNLSLET WFRFVVWMAL GVIVYFVYSK
NHSVLGRRER GEVIESLAD
|
|---|
| |