Gene Tpau_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1170 
Symbol 
ID9155310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1198408 
End bp1198962 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646140 
Protein GI296138897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGC GAGCGGAGCA GGCGGAACGG ACCCGGGCGG CGATCCTGGC GGCGGCCGAG 
GCGCTGATCG CCGAGCGGGG CTTCGACAGC ACCTCCCTGC AGCAGGTTGC AGACCGCGCC 
GGCGTGACGA AGGCGAACGT CTACTACTAC TTCCGCACGA AGGAGGCCCT GCTCGGGGGC 
GTCGTCGCGC CGCACGCGCA GGCGCTGCGC GCACTCGTGG ACGGCGCTGC CGCACTGACC 
GACCCCGCCG CGCGGCGCAG CGCGCTCATC ACGGGCTACG TCGAGCAGTC GATCCGCGCC 
TTCCGGCGCA TCGGCGCAGT CGGCATCGGC GGCGACCCCG CGCTCCGTCG CGCGATGGCA 
GCCACCGCCG ACCTCGACGC CATCGCCGCG GATGCGCTCC CCCTTCTCCT CGGGCCGGAC 
CCGACGCCGC GCCGGCTCGC CGGCTGGCTG CAGCTCGGCG ATCTCGGGCC CGCGCTGCGC 
GGGCTCGCTC ACCTTCCTGA CTCGGAGGTG CAGGACGCCC TCGTTGAACT CTGTGAGCGC 
GCTCTCGCTG CGTGA
 
Protein sequence
MSTRAEQAER TRAAILAAAE ALIAERGFDS TSLQQVADRA GVTKANVYYY FRTKEALLGG 
VVAPHAQALR ALVDGAAALT DPAARRSALI TGYVEQSIRA FRRIGAVGIG GDPALRRAMA 
ATADLDAIAA DALPLLLGPD PTPRRLAGWL QLGDLGPALR GLAHLPDSEV QDALVELCER 
ALAA