Gene Tpau_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1142 
Symbol 
ID9155282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1171491 
End bp1172201 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646112 
Protein GI296138869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.627372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCC GGGTAGATTC ACTGTCCGTG AAGCCATCAG GTTCGCGCTC GCCGGACGAG 
CGGTCGACGT GCCGCCGGGG ACGCACGTAC GGCGGCGCCG ACGCCGAGAC GCGGCAGGAG 
GACCGCCGAA CCCGGATCGA GGAATCCGCG CTCGACCTGT TCGCCTCCCG TGGCTACCGG 
CACACCACCG TCTCCATGAT CTGTGAGCAC GCCCGTGTCT CCCGGCGTCA CTTCTACGAG 
CTGTTCGACG ACCGCGAGGC GGTCCTGCGG CACGTGTACG ACCTGGTGCA GGCGCGGACC 
CGCGAGGCCG TGCTCGCGGC GATCGGCGCC CACGTCCGCG AGCACGGAGG ACGGGGCGAC 
ACCACCGCTC TGGTGACCGC CGCACTCGAC GCCTATGTCG CCGTCCTCCT CGAGGATCCG 
CGCGGTATCC GCATCGGCTT CGTCGAGGTG GTGGGTGTCA GTCCGGATAT GGAGCAGCAC 
CGCCTGGGAA ACCGGCGCGA GTGGGCGCAA CTGCTGCAGG GCGCCGCGGT GACCGCGGGC 
GCCGCACACG TGCCGGCGTG GGTGTACGCG GCGTTCATCC CGTCGCTCAA CGAATTCCTC 
ATGGCGTGGT GGCAGCATTC CGACGACCGC TCCGACCCGC GCGAGCTGGT GCAGGTCCTC 
ACCGCGGTGC TGACCACCCT GATGCGGCAA GCGGTCTCCG GAGCGGGCTG A
 
Protein sequence
MTSRVDSLSV KPSGSRSPDE RSTCRRGRTY GGADAETRQE DRRTRIEESA LDLFASRGYR 
HTTVSMICEH ARVSRRHFYE LFDDREAVLR HVYDLVQART REAVLAAIGA HVREHGGRGD 
TTALVTAALD AYVAVLLEDP RGIRIGFVEV VGVSPDMEQH RLGNRREWAQ LLQGAAVTAG 
AAHVPAWVYA AFIPSLNEFL MAWWQHSDDR SDPRELVQVL TAVLTTLMRQ AVSGAG