| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1131 |
|---|
| Symbol | |
|---|
| ID | 9155271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1155774 |
|---|
| End bp | 1159058 |
|---|
| Gene Length | 3285 bp |
|---|
| Protein Length | 1094 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003646102 |
|---|
| Protein GI | 296138859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG CGAGCGGAGG CGCGGGGCGC GTCCGCCGGC CGCGGCTGTC GCTGCAGTAC
ACCGCGCCGC AGCCGCCGCC AGTGCGGGAG TGGGGCGGGC CGGTCGCCGA GCTGGTGGCG
CCCGCGGCGG GTGCACTTGC ACTCGACGTG GGCGGCTGGG CGCCGTACCG GATCCGCGGC
GGTCCGGGTA CCGGCAAGAC CTCGGCCCTG ATCGATATCG CCGTGGCCAA GCTCACCGAT
CCGTTCGTCG AGCCGGAATC GGTGCTCATC CTCACCGGGA GCAAGCGGTC GGCCGTCGCA
CTGCGCCGTG AGCTGTCGGC GCGCGTGCTC GCCGACCGCG GCCGCGCAGG GGTGCACGCC
TCCGGGGAGC CGCTGGTGCG CACCGTGCAC TCGCTGGCCT TCGCCGTGCT GCGGCTCCAG
GCCGCACACG CCGGTGCGCC CCCGCCCCGC CTGATCACCG GTTCGGAGCA GGACGCGGTG
GTGCGCGAGT TGCTACGCGG ACACGTGGAC GACGGTGGAG CGTTCTGGCC GGAGCGGTTG
CGGCCCGCGC TGGTGACCGG AGGATTCGCC GGGGCGCTGC GTGACCTGTT CGCACAGGCG
GCCCAGCGCG GCGCCGGTCC CGAGGAGATC GACGAGCTCG CCGCCCGCTA CGACAGGCCC
GAATGGGCCG CCGCCGCGGC GGCGCTGCGC GAGTATCAGC AGACCACGCT GCTGCGCGGC
TCCGTCGGGC TGGCCGGTCC GACCGCCGTG GCCCCGGCGG TCGACGCGGC GGAGTTGATC
GACGCCGCCG TCACGGCACT GGCCGGTGAC GACGCGCTGC TCGCACAGCA GCGCGAGCGG
ATCCGATTCC TCCTGGTCGA CGATGCGCAG AACCTGGACC CGCTGGCCTC GGCGCTGATC
CGGTTGCTGG GCACGGGCAC CGAGCTCACC GTGATCGCAG GCGATCCCGA TCAGGCGATC
AACTCGTTCC GCGGCGCCAG CACCCGTTTC CTGCAATCGC TCGACGTCCC CGCCGAGCGG
GACATCGTGC TGGAGCGCAG TTTCCGGTTC GGTGAGGAGA TCACCGCGAC GGTGAACCGG
GTCTCGTCCC GTCTGCCGAA CCGGTTCGGA TCGGTCGCGC CGGAACGGCC CCGGCCGGGT
TCGGCGGCGG TGCGGTTGTT CTCCACTGCG GCGAAGGAGG CCGACGCGAT CGCCGCGATG
CTGCGCCGTG AGCACGTCCT CGGCGGTGTG CCCTGGGAGG ACATGGCCAT CGTCGTGCGG
TCGGTGTCGG CTTCGGTCGC GCCCCTGCGC CGGGCTCTCG CGTACGCGGG CGTCCCGGTC
ACCGTCGCCG CGGACGATGT GCCCTTGGCG CGCCAGCGCG CGGTACACGC CCTGCTGTCG
ACGGTGCGCG CGGCGTGCGA GCCGGAATCC CTCGATCCGG CCGAGGCGGT GGCCCTGCTG
TCCGGTCCGG TCGGCGGCGG CGATCCGCTC ACGCTGCGGC GGGTGCGCCG CGCGGTGCGC
CGCGCCGACC CGTCGGACGA GCGCGGCTCC GCGGAGATCC TCGGCGCGGT GGTCGCGGGG
TCCGTCGACT TCGCGCCGTA TCGCGCCGCA CTGACCGAGC TGGAGGCCGA ACCGGTGGAG
CGGGTGCTCG CGGCGGTGCA CGCCGCCCGC GCCGCCGCGG TCGAGGGCAC GGTCGAGGAG
GTCTTGTGGG CCGCGTGGTC GGTCACCGGA TTGTCGGGCC GGTGGGGCGC GCTCGCCTTG
CGCGGCGGCA GTGTAGGCGA ACAGGCCGAC CGCGATCTGG ATGCGGTGAT GGGATTATTC
GATGCCGCGG CAGATTTCAC CGATACTCTG CCCACGGCGT CACCGGCCCG GTTCATCGAG
TACATCGAGC AATTGCACAT CCCGCGGGCG TCGGGCGGGG GCCGACGCGA GACCCCCACC
ACCCCCGGCG TCACCGTGGT ATCCGCACAC GGTGCCGCCG GCCGGGAGTG GGACGTGGTG
GCGGTCGCCG GCGTCCAAGA GGGGCGCTGG CCGAATCTGC GCCGGCGCGG CGGTCTACTC
GGTACCGAGG AGCTGCTCGA CGCGCTCGAC GGTATCGACC CGGCGGCATT GCCCACCGTC
TCCCGGTCGC TGCCGCTGCT CGCGGAGGAG CGGCGGCTGT TGTTGGTCGC GTGCTCGCGG
GCTCGCCGCA CCCTGCTCAT CACCGCGGTG GACACCGCGG ACGGCGATGG TGACCTGGTG
CCCTCGCGGT TCCTGCAGGG CATCGCGCCT TCGGGTGAAG AAGACCCCGA AACCTACACC
CCCGCGGTGG AATCCGAGCC CGCCGCGTCG CTCGACCTGC GCACGCTGGT AGCCACGCTC
CGTGCCGCGG CGTGCGATCC GCGGCGGGAG GAATCCGAGC GCGCGCACGC CGCCCGACAG
CTCGCGCGGC TCGCCGCGGA CCGGGTGCCC GGTGCTCATC CCGACTCCTG GTACGGCCTG
GCCGGCGCGA GCACCGACGA TCCGCTCTGG CAGCCCGACG ACGGCCCGGT CGCGCTCTCG
CCCTCGAACG TGGAGGCGCT GTCCGCCTGC GCGCTGCGCT GGATGCTGGA GCGGTTCGGC
GGCAGCGACG GTGATTCCGC GAAGCAGGCC ACCGGCAACC TGGTGCACAC CCTGGTGCAG
GCGGTCGCCG GCCGGATCCC GAAAGACGAG GTGACACGCT CGCTCGAGAA GGTCTGGGAC
CGGGTCGATC TGGAGGCCGA CTGGTTCGCC CGGCGCGAGC TGATCCGAAC CGAGGAAATG
CTCGAATCGT TCCGGGCGTG GCTCGCGGGC AGTCGATCCG AGCTCACCGA GGCCGGGGTC
GAGGTGCCGA TCGACACCGT GATCGAGGGG ACCGACGGTG CTCCCGACGT TCAGATCCGG
GGCCGGGTCG ACCGGCTCGA GCGCGATCCC CTGGGCCGCA CTGTGGTCGT CGATGTCAAG
ACCGGGCGGA CTCTTCCCAG CCAGGCCGAT GGGCAGGCGC ACGCGCAGTT GCGTACGTAT
CAGGTGGCGA TCGCGCACGG CGGCCTCGGC GGTGTCCCCG AGACTCCCGG CGGCGGGAAA
CTGCTGTACG TGGCCAAGCC GCACAATAAG ACCGGCGCCA CGGTACGGGA GCAGGACGCG
CTCACCCCCG CCGATGTGGA CGAGTGGCTC GGTGTAATCC GGGAGGCCGC GCGCCGGACC
CGCGGCCCGG AGTTCGCGGC CACGCTCAAC GCCTCCTGCC AGCACTGCGC GGTCGCGTCG
TGCTGCCCCG TGGTCGACAA GGGCCGGAGC GTGACCGATG ACTGA
|
|---|
| Protein sequence | MAEASGGAGR VRRPRLSLQY TAPQPPPVRE WGGPVAELVA PAAGALALDV GGWAPYRIRG
GPGTGKTSAL IDIAVAKLTD PFVEPESVLI LTGSKRSAVA LRRELSARVL ADRGRAGVHA
SGEPLVRTVH SLAFAVLRLQ AAHAGAPPPR LITGSEQDAV VRELLRGHVD DGGAFWPERL
RPALVTGGFA GALRDLFAQA AQRGAGPEEI DELAARYDRP EWAAAAAALR EYQQTTLLRG
SVGLAGPTAV APAVDAAELI DAAVTALAGD DALLAQQRER IRFLLVDDAQ NLDPLASALI
RLLGTGTELT VIAGDPDQAI NSFRGASTRF LQSLDVPAER DIVLERSFRF GEEITATVNR
VSSRLPNRFG SVAPERPRPG SAAVRLFSTA AKEADAIAAM LRREHVLGGV PWEDMAIVVR
SVSASVAPLR RALAYAGVPV TVAADDVPLA RQRAVHALLS TVRAACEPES LDPAEAVALL
SGPVGGGDPL TLRRVRRAVR RADPSDERGS AEILGAVVAG SVDFAPYRAA LTELEAEPVE
RVLAAVHAAR AAAVEGTVEE VLWAAWSVTG LSGRWGALAL RGGSVGEQAD RDLDAVMGLF
DAAADFTDTL PTASPARFIE YIEQLHIPRA SGGGRRETPT TPGVTVVSAH GAAGREWDVV
AVAGVQEGRW PNLRRRGGLL GTEELLDALD GIDPAALPTV SRSLPLLAEE RRLLLVACSR
ARRTLLITAV DTADGDGDLV PSRFLQGIAP SGEEDPETYT PAVESEPAAS LDLRTLVATL
RAAACDPRRE ESERAHAARQ LARLAADRVP GAHPDSWYGL AGASTDDPLW QPDDGPVALS
PSNVEALSAC ALRWMLERFG GSDGDSAKQA TGNLVHTLVQ AVAGRIPKDE VTRSLEKVWD
RVDLEADWFA RRELIRTEEM LESFRAWLAG SRSELTEAGV EVPIDTVIEG TDGAPDVQIR
GRVDRLERDP LGRTVVVDVK TGRTLPSQAD GQAHAQLRTY QVAIAHGGLG GVPETPGGGK
LLYVAKPHNK TGATVREQDA LTPADVDEWL GVIREAARRT RGPEFAATLN ASCQHCAVAS
CCPVVDKGRS VTDD
|
|---|
| |