Gene Tpau_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1128 
Symbol 
ID9155268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1153963 
End bp1154649 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content73% 
IMG OID 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003646099 
Protein GI296138856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.421217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGCTC TGAGCGGATC GCCCCGCCGG ATCCTCGTCG CGCACGGCAC CCGCTCGGCG 
CACGGCGTCG CCATGATCCG CGCGCTCGCG GCCGCGGTGG CCGCTCGCAC GGGCCCGGTC 
GAGGTGGGCT TCGTCGATGT GCTGGGCCCG TCGCCGTCGG AACTGCTGGT GCAGTCGGAT 
CGCCCGACGG TGCTGGTGCC CTGTTTCCTC GCCGGCGGCT ACCACGTGCA CACCGATGTG 
CCCCGACATA TCGCCGCCAG CGCTCACCCC GATGCCCGGC TCACTGCGGC GCTGGGGCCC 
GATCCCGGTC TGATCGGCGC ACTGCTGCGC CGATTGGACG AGGCCGGATG GCGCTCCGGC 
GACGCGGTAC TCCTCGGTGC CACCGGCTCG TCCGATCCCC GGGCCCGCGA GGACGTCCGC 
ACCATGGCGG CGCTGCTCGC TGCCCGGATC GGCACCGAGG TCCCGGTGGG ATTCCTCGCC 
GCCGGTGACC CGACGGTGGA CACGGAGGTG GCCCGGTTGC GCGATCGAGA CCGGCGACTG 
ATTCTCACGT CGTACCAGTT GGCGGACGGC GTTTTCCATG CCCGGCTCAC GGCGGCCGGC 
GCCGATGCGG TCACCGCGCC GATCGGCCTC GCGCCCGAGG TGATCGACCT CATCGTGCAC 
CGGTTCGAGC AGGCTCAGAC TCGATAG
 
Protein sequence
MAALSGSPRR ILVAHGTRSA HGVAMIRALA AAVAARTGPV EVGFVDVLGP SPSELLVQSD 
RPTVLVPCFL AGGYHVHTDV PRHIAASAHP DARLTAALGP DPGLIGALLR RLDEAGWRSG 
DAVLLGATGS SDPRAREDVR TMAALLAARI GTEVPVGFLA AGDPTVDTEV ARLRDRDRRL 
ILTSYQLADG VFHARLTAAG ADAVTAPIGL APEVIDLIVH RFEQAQTR