Gene Tpau_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1115 
Symbol 
ID9155255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1141057 
End bp1142295 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646086 
Protein GI296138843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0278594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAAAC CCGAGCGCCG GACCCGAGTC GACCTCGCCG TGACGGCCGC GATCGTGGTC 
GCGGTCCTGA TCGCGGGCCT GGCCGTGTGG AACTTCAGTT CGGCCCGCAA GACCGTGAGC
GAGACCGTGC CGGCACCGTC GGCCGAGGCG ACCCCCTTGG CCGAACTCCC CGCCGCACTG
CGTCCCACCT GGACGAGAAC GGCCGATCGG CCCGCACTCT CGATGGCCGG CGGGGTGGTC
CTGGCCAGCG GCGGCGAGGT CTCGGGCCAC GATCCCGCGA CCGGTGCGCG CACCTGGCGC
TACCAGCGCG ACACCGATAC CTGCGGCCTG TCCACCAACG CCGGGTTGGT GCTGGCCTAC
TACCCCGACG CCCGCGGCTG CGGCGAGATC ACCGCACTCG ACCCGGGCAC CGGACAGCGC
AAATACACCC GATCCGGACA GCAGGATCCC GATATCACCA CCGCGTCCGA CGGCAGTTAC
GCGGTCGCGC AGGGGCCGCG TCGGGTGGAC GCCTTCCGGT CTGACCTGGT CTCCACGGTG
CAGTACGGCC GCCCCGATGT GCCGGTCAAC CCCGGTGTAC AGCCCCGCTC GGGCTGCACC
CTCGGCTCGG CATTGCCCGC CAGCCCCTCA CTCGTGGTGC TGGAGAGCTG CCCCACCGAA
CCGAATCCGC GACTCACCGT GGTCGGTATC GCCCCCAAGG ACGCCGATCG GCCGCAGGAG
ACCTCCTCGG TGGTCGCGCC CGCGCTGGGC ACCGCGAGCA CCTCCGAGGA CGACCGCCCA
CGACTCCTGG CCGCCACCCG CGACGGTGCC GCCGCGTACG TCCCCGCCCA CGACGGGCAG
CCCGCACGGG TGGTCACCGT GGGATACCGC GGCGAGGTGC GCCAGTCGGT GGACATCACC
ACCACACCGG GCGGTGCGCC GCGCAGCGTT CCCGTGGTCG CCGAAGCCGG GGTGGTCTCG
TTCTTCACCG GCACCTCGAC CGTGGTGATC GATGCGTCGA CGCTGATCGC GCAGATGGTG
ATCCCCGGAA CCCTCGGCCC CGGAACGCTG ATCGGTGGAC AGATCGTGGT GCCCGGCCCC
ACCTCACTGG CGGCGTACAA CCTGGCCGGC CGCAATCAGG TACGGCTGGC ACCGATCCCG
CGGCCCGGGT ACACCGGCGG GCCCGTATTG CTCGCCCTCG CGGGCGAGAC CATCGTCGCC
CAGTGGGGGA AGACGGTGCA GGCGTACGCG CCCGCCTGA
 
Protein sequence
MVKPERRTRV DLAVTAAIVV AVLIAGLAVW NFSSARKTVS ETVPAPSAEA TPLAELPAAL 
RPTWTRTADR PALSMAGGVV LASGGEVSGH DPATGARTWR YQRDTDTCGL STNAGLVLAY
YPDARGCGEI TALDPGTGQR KYTRSGQQDP DITTASDGSY AVAQGPRRVD AFRSDLVSTV
QYGRPDVPVN PGVQPRSGCT LGSALPASPS LVVLESCPTE PNPRLTVVGI APKDADRPQE
TSSVVAPALG TASTSEDDRP RLLAATRDGA AAYVPAHDGQ PARVVTVGYR GEVRQSVDIT
TTPGGAPRSV PVVAEAGVVS FFTGTSTVVI DASTLIAQMV IPGTLGPGTL IGGQIVVPGP
TSLAAYNLAG RNQVRLAPIP RPGYTGGPVL LALAGETIVA QWGKTVQAYA PA