Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1104 |
Symbol | |
ID | 9155244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1131328 |
End bp | 1133433 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Male sterility domain protein |
Protein accession | YP_003646075 |
Protein GI | 296138832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.972313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGCT ACTTCGTCAC GGGCGGGACC GGCTTCATCG GTCGCGCCGT TGTGGCGCGC CTCGCCGCCG CCGACCGCGA CGCGACGATC TACGTGCTGG TCCGCGATCA GTCACTGCCC CGGTTCGAGC GCCTGATCGC CGATCTGGGC CACGAATCGG CGCCCCAGGT GGTACCGGTG CCCGGCGACA TCACCGAGCC CGGTCTGGGC ATCTCCCCCG GCGATCTGCC CGCCGGTGTG GACCACGTGA TCCACCTCGC CGCCCTGTAC GACATGGAGG CACCCGAGGA GGCCCAGCAG ATCACCAACG TCGACGGCAC CCGGAACGTG ATCGACGTGA CCCGGGCGCT CGGCGCCACT CTGCATCACG TCTCGTCGCT GGCCGTGGCC GGCAACTACG AGGGCCGGTA CGCGGAGACC GACTTCGACG TGGGGCAGAG CTTCCCCAGC CCGTACCACC GCACCAAGTA CGAGGCCGAA CAGCTGGTGC GCGAATCCGA TGTGCCGTGG CAGGTGTACC GCCCCTCGAT CGTGGTCGGT GATTCGGTGA CCGGCGCCGG CGACAAGATC GACGGGCCCT ACTACTTCTT CCCGTTCCTG CGCCTGATGG GCACCATCCC GCACCACTTG CGGGTGCCCT TCGCCAACCT CGGCTACACC AACATCGTGC CGGTCGACTT CGTGGCCTCG GCCCTGGTCG CGTTGGTGAC CACCCCGGCA CCGCCGGGCA CTGTGTACCA CCTGGCCGAC CCCAAGGGCC AGAGCATGAC CACGCTGTAC GACGCGGTCG CACCGGCCTT CTCGGGCCCG AAGACGGTCT CGCTCCCCGG CGCACCGCTC GGCGAGTTCG CGGCGCGCGT GGGCCGCCGC AACGAGGTCC GCGCCCTACG CGACACCGTG GCCCGGCAGT TGGGCATTCC CCCGTCGGTC CTGGACTACC CGTTCTACAA CACGCGGTTC GACTCGGCCG CCACGCACGC CATCCTGCGT CGGCTCGGAG TACGACTGCC GCGCCTGAAG TCGTACGGCC CCAGGATCTT CCAGTACTGG GCGCAGAATC TCGACCCGGC ACGCAACCGG CGCGACGATC CCCGCGGCCC CCTGGTGGGC AAGCACATCC TGCTCACCGG CGGCTCATCG GGCATCGGCA AGGAAGCCGC GAAGCAGGCG GCGGCCAAGG GCGCCCACGT GTTCATCGTG GCGCGCAAGC CGGAGGACCT GGCCGAAGCG GTGGCCGAAA TCGAGGCCGA GCCCGGGATT CCCGGCGTCC CGAAGGGCAC GGTGCGCGCC TACCAGTGCG ATGTGACCGA CCCCGAGGCG GTGCGCACCA CGGTGCAGCA GATCCTCGCC GAACACGGCC ACGTGGATGT GCTGGTCAAC GGTGCCGGCC GATCGATCCG GCGATCCACG ATCAACTCCG TGGACCGCGC CCACGACTAT CAGCGGACCA TGGCGGTCAA CTACTTCGGC GCCGTGTATC TGATCCTGGA ACTGTTGCCG CACATGACCG CCCGCAAGTC CGGTCATGTA GTGAATCTGT CGTCGATCGG CGTGCAGGTT CGCGGACCGC GGTTCGCGGC GTACATCGCG TCCAAATCAG CGCTGGAGGC GTTCAGCGAT ATCACCGCCT CGGAGACGGT GTCGGATCAC GTGACCTTCA CCAACATTCA CATGCCGCTG ACCCGCACCC GGATGATCGA GCCGACCGAA GGCTACGACA ACGCCATGGC CCTGTCGGTC GAGAAGGCCG GCCAGATCGT GGTGCGGGCG ATCGTCGAAC GGCCGCGCCG GATCGACACC CCGCTCGGCA CACTCGCCCA GTTCGGCCAG TTCCTGTCCC CGCGGATCTC CGCGGCCGCG CAGCACCAGG GCTACCTGTT GTTCCCGGAG TCGGCCGCGG CCGAGGGACG CGAACGTGAC GTCAATGCCA TCGAAGCGGT TGTGGCCGAG GTGGATACGC CGCGCGGGCG GCTCGCCGCC ACCAAGGATC TATCGAAGGA CCTGTCCACC GCGGTGGCCA GCCCGCTGTT CGGCATCTCC GGCGACCAGG GCCTGCGTCG GCTGGCCCGC AAGACCCTCA ACCGGCTGCC CGGTATCAAC TGGTAA
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Protein sequence | MASYFVTGGT GFIGRAVVAR LAAADRDATI YVLVRDQSLP RFERLIADLG HESAPQVVPV PGDITEPGLG ISPGDLPAGV DHVIHLAALY DMEAPEEAQQ ITNVDGTRNV IDVTRALGAT LHHVSSLAVA GNYEGRYAET DFDVGQSFPS PYHRTKYEAE QLVRESDVPW QVYRPSIVVG DSVTGAGDKI DGPYYFFPFL RLMGTIPHHL RVPFANLGYT NIVPVDFVAS ALVALVTTPA PPGTVYHLAD PKGQSMTTLY DAVAPAFSGP KTVSLPGAPL GEFAARVGRR NEVRALRDTV ARQLGIPPSV LDYPFYNTRF DSAATHAILR RLGVRLPRLK SYGPRIFQYW AQNLDPARNR RDDPRGPLVG KHILLTGGSS GIGKEAAKQA AAKGAHVFIV ARKPEDLAEA VAEIEAEPGI PGVPKGTVRA YQCDVTDPEA VRTTVQQILA EHGHVDVLVN GAGRSIRRST INSVDRAHDY QRTMAVNYFG AVYLILELLP HMTARKSGHV VNLSSIGVQV RGPRFAAYIA SKSALEAFSD ITASETVSDH VTFTNIHMPL TRTRMIEPTE GYDNAMALSV EKAGQIVVRA IVERPRRIDT PLGTLAQFGQ FLSPRISAAA QHQGYLLFPE SAAAEGRERD VNAIEAVVAE VDTPRGRLAA TKDLSKDLST AVASPLFGIS GDQGLRRLAR KTLNRLPGIN W
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