| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1078 |
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| Symbol | |
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| ID | 9155218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1102903 |
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| End bp | 1104687 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | Lipoprotein LpqB, beta-propeller domain-like protein |
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| Protein accession | YP_003646049 |
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| Protein GI | 296138806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAAT CCCGGATCAT GCGGCTGCTG GCCGCGGTCC TCGCCGTGAG CCTCGTCGTG
TCCGGCTGCG CGACCATCCC GGAGAGCTCG AATCCGCGGG TGATCGGCGA TCTGGGCGCG
CAGCAGGCGG TGGACCGCAA CATCACTCCG CGCAAGGATG CGGCGCCCGA GGCGATCGTC
CGCGACTTCC TCAAGGCCAA TGCGATGGCG GACAACAACT ACGCCGCGTC GCGCAAGTTC
CTGGTGCCGG CTGCGGCGTG GCAGGTGCCG CAGCAGGCGG TGGTGGTCAA GAACATCGAC
GTGCTGCCCA CCGAGCGCAC CACCGACCTG ATCAAGGCGA CGATCCGCGC GCAGGCCACC
GGTTTCCTCG GGCCCGACGG CACGTTCGAA CCCACCACCC AGTCGATCAC GCAGAACGTG
CAACTGGTGC AGACCGACGG GCAGTGGCGG ATCCAGGGCA TCAGCTCGGT CGGCGAGACC
CCGATGCTGG TGATCGACAC CGAGCAGTTC CGTTCGGTCT ACAACCGCTA TCTTTTGTAC
TTCCCGGATC CGACCGGCCG CACGCTGGTG CCGGACGCGC GCTGGTTGGC CAGCCCCCGA
GCCAAGTTGC CCGCCGATCT GCTCATGCTG CTGGTGCGCG GCCCGCGGTC GAGCCTGGTG
GGCGCGGTGT TCAATCCGTT CGGTAACACC GCTGCGGTGC GGGGACCGAT CACCGATGCG
CAGGGCGCAC AGCGTGATCC GGGGGTCGGC TACGCCGGCG TGCGGGTCGA TTTCACCGGC
TTGCCACGGA TGGATCCCGA TGTGGGCCGG CTGCTCGCCG GGCAGGTGGT GTGGACCCTG
GCCGGCGCCG ATGTGCAGGG GCCCTATGTG ATCACCGTCG ATGGCACGGC GATCGACGAC
AAACACCAGG CCGGATGGAA CCCGAACGAC GTGGCCTCCA GCAGCCCGAA CGCCTCGTCG
GATCTGGCGG TGGGGCTGCA CGGCGTGCTC GACGGCAGGT TCGTGAAGGT GTCCGGGGCG
GCGGTCACCC CGGTCGCGGG GCCGCTCGGC GAGAGCACCG CGATCCGCTC GGTGGGTCTG
TCGGCGTCGG GCCGGCAGGT GGCTGCGGTG CTCGACTCCG GTCCGCGCGG CGGCCCGGGT
ACCTCGCTGA CCATCGGCCC GTACGGCGGC GTCCCCACCC AGGTACTCAG CGCGGGCGCG
ATGACCAGGC CGACCTGGAT GCCCGACGAT GCGACGGTGT GGACGGTGCT CGACGGCAAC
CGCGTGGTGC GGCTGCGGCA GGACCAGACC ACCGGCGAGG TCACCTCCTC CGATGTGGAT
TCGGCTGAGG TCGCCGCGGC CGCGCCGGGG CCGATCACCG AACTGCGGCT GGCCCGCGAC
GGCGTGCGGG TCGCGCTCAT CGCGGGTGGG AAGGCATTGG TCGGCGTGGT CCTGACCAAG
CCCGACGGGC AGTCCATGAT CTCCCGCCTG CAGCAGGTGG TCACCGACCG TGACCTGGCG
CCGTCGTCGA TCGACTGGCA GACCGGCGAC GCTTTCGTGG TCGGCCGCAG TACCACCGAA
TCGCCGGTGC TCACGGTGCA CTACGACTAC GGCGAATCGC TCGCCGTGCC CAGCCGCAAC
CTGTCGCCGC CGGTGTCCAT GGTCGCCGCG TCGACCAGCC GGGTCTACGC CACCGATTCG
TCCGGAGTGT GGAGCATCGG CGTCGGTACC GATTCGGGCG CGCAATACTG GAGTCAGGTG
GATCGCCTGG CGGGGGGCCG GGCGAACCCG GTGCTGCCGG GGTAG
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| Protein sequence | MRESRIMRLL AAVLAVSLVV SGCATIPESS NPRVIGDLGA QQAVDRNITP RKDAAPEAIV
RDFLKANAMA DNNYAASRKF LVPAAAWQVP QQAVVVKNID VLPTERTTDL IKATIRAQAT
GFLGPDGTFE PTTQSITQNV QLVQTDGQWR IQGISSVGET PMLVIDTEQF RSVYNRYLLY
FPDPTGRTLV PDARWLASPR AKLPADLLML LVRGPRSSLV GAVFNPFGNT AAVRGPITDA
QGAQRDPGVG YAGVRVDFTG LPRMDPDVGR LLAGQVVWTL AGADVQGPYV ITVDGTAIDD
KHQAGWNPND VASSSPNASS DLAVGLHGVL DGRFVKVSGA AVTPVAGPLG ESTAIRSVGL
SASGRQVAAV LDSGPRGGPG TSLTIGPYGG VPTQVLSAGA MTRPTWMPDD ATVWTVLDGN
RVVRLRQDQT TGEVTSSDVD SAEVAAAAPG PITELRLARD GVRVALIAGG KALVGVVLTK
PDGQSMISRL QQVVTDRDLA PSSIDWQTGD AFVVGRSTTE SPVLTVHYDY GESLAVPSRN
LSPPVSMVAA STSRVYATDS SGVWSIGVGT DSGAQYWSQV DRLAGGRANP VLPG
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