Gene Tpau_1067 details

Gene Information

• Locus tag: Tpau_1067
• ID: 9155207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1092584
• End bp: 1093231
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 68%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003646038
• Protein GI: 296138795

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0267044
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCTGG CCCGAAAGGC CGGACCCCAG CACGAGCAGA CGGCCCAGTA CGCGATGTTC 
GACGATGAGC GCGCGACCGA GACCGCGGGC ACCGCCGCAT TCGATGCGAC GGGTGACCGC 
TCGGATATGC CGTCATGGGA TGAGCTGGTC CGGGAGCACG CCGATCGCGT GTACCGGCTT 
GCCTACCGCC TCTCCGGCAA CGCGCAGGAC GCCGAAGACC TCACGCAGGA CACCTTCATC 
CGCGTCTTCC GCAGCCTGCA GAGCTACGAG CCCGGCACCT TCGAGGGCTG GCTGCACCGC 
ATCACCACCA ACCTGTTCCT GGACATGGTC CGACGCCGCA ACCGCATCCG CATGGAGGCG 
CTGCCCGAGG ACTACGAGCG GGTTCCCTCC GGTGATCCGG ACCCGGGGCA GATCTACGCC 
GACGCCAACC TCAATCCGCA GCTGCAGGTG GCGCTCGACG CGCTCTCGCC CGAGTTCCGT 
GCCGCCGTGG TGCTCGCCGA CATCGAAGGC CTTTCCTACG AAGAGGTCGC TGCCACGCTG 
GGCGTCAAGC TCGGCACCGT GCGCTCGCGC ATCCACCGCG GCCGCAAGTC GATCCGCGAG 
GCGCTCGAGA ATCAGGGCCT GACCAGCAGC GCATCGCTGG CCTACTGA 

 

Protein sequence

MALARKAGPQ HEQTAQYAMF DDERATETAG TAAFDATGDR SDMPSWDELV REHADRVYRL 
AYRLSGNAQD AEDLTQDTFI RVFRSLQSYE PGTFEGWLHR ITTNLFLDMV RRRNRIRMEA 
LPEDYERVPS GDPDPGQIYA DANLNPQLQV ALDALSPEFR AAVVLADIEG LSYEEVAATL 
GVKLGTVRSR IHRGRKSIRE ALENQGLTSS ASLAY