Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0990 |
Symbol | |
ID | 9155130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1012334 |
End bp | 1013191 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003645962 |
Protein GI | 296138719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGACA CCGCGCTCGA CGCCTTCACC CGCGCGCGGC CGCGCCTGTT CGGTATCGCC TATCGGATCC TCGGCTCCGC GCCGGACGCC GAGGACGTGG TGCAGGACAC GTGGTTGCGA TGGTCCGGCC GGGACCGCAC CGATGTGCGC GACCCCGAGG CCTTCCTCGT GGTCACCGCG ACCCGACTGG CCCTCACTCA GGCGCAGTCC GCGCACGTGC GGCGCGAAGC GTATGTGGGA CCGTGGTTCC CGACGCCCGT CGACACCGAA TCCGATCCAC AACTCGGCGC CGAACGGCGT GCGACCCTGG AACTGGCGGT GCTGCACGTG CTGCAGCGAC TCGGGCCCGC CGAACGTGCC GCCTACGTCC TGCGGGAGGC CTTCGGCCAT CCGTACGACC GGATCGCGGA GATCCTGCAG ATGCGCGAAC CCGCCGTGCG ACAGCTGGTG AGCCGGGCCC GCAGGCGGCT CGACGGTGAG CGGCGTACCA CTGTCTCGCA TGACCGGTTG CGCTCGCTTC TGGACGCCTT TCTAGCGGCC GCACACGCCG GCGATATCGC GGGCCTCGAA GCGGTGCTGG CCGCGGATGT GACGAGCGAG ACCGACGGTG GTGGGGTGCG TCGAGCCGCG CGTCGCCCCG TGGTGGGTGG CAACGATGTC GCCCGGTTCG TGGCCGGCTT CTCGACGAGG TTCTGGCCCG ACGCCACGGT GCGGCGGGTG CAGGCCAACG GGCGGCCTGC GGCATTGTTC CTGCACGACG GCCGGCCCTC GGCGCTGCTG TGCGTGGTCG CCGACGAGAG CGGGATCACG CAGCTGATGT GGGTGATGAA CCCGGACAAG CTCGCCGATT TCCGCTGA
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Protein sequence | MSDTALDAFT RARPRLFGIA YRILGSAPDA EDVVQDTWLR WSGRDRTDVR DPEAFLVVTA TRLALTQAQS AHVRREAYVG PWFPTPVDTE SDPQLGAERR ATLELAVLHV LQRLGPAERA AYVLREAFGH PYDRIAEILQ MREPAVRQLV SRARRRLDGE RRTTVSHDRL RSLLDAFLAA AHAGDIAGLE AVLAADVTSE TDGGGVRRAA RRPVVGGNDV ARFVAGFSTR FWPDATVRRV QANGRPAALF LHDGRPSALL CVVADESGIT QLMWVMNPDK LADFR
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