Gene Tpau_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0978 
Symbol 
ID9155118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1000592 
End bp1001746 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNLP/P60 protein 
Protein accessionYP_003645950 
Protein GI296138707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGA TCGTGCAGGC GTTGGCGGCG CCCCTGCGCA CACTCCTGGA CGCCTTCGGT 
TCCGGCGACC TCACCACCGG AGGCGTCGAT GCGGCGATCG CCGCAATCCA ATCCGAGTTG
GACCGGATCA GCGCACAGAC CCGCAGCACC AACGTGACGG TCGGGCAGTC GTGGACGGGA
CAGGACGCGG GCGCCGCGCA GCGGTCCATC GGCTCGGGCG GGGTATCGGC GTTGGCACTG
GCCCAGCACA CCGGTTCGAT CAAGGAGTCG GTCACCGTGG CCGCCGAGAA GGTCCGTGGC
GGGCAGGCCG AGCTGCGGCG GATCCTGGAC TCCTTCCTGC AGCAGGCGGA GGCCGCCGAT
CCCTCGCTCG CCAACCCGGG CGGGCTGATC GCGGTGCTCA CCCTTGCCGC GGATCACGTG
CAGCAGGCCC TCGACGTGCT CACGAAGGTG CGCGGCGAGC TCGACGATGA GACCGGGAAG
GTGAGCGAGC TGGCGGCGAA CACACCGACG GCTCCGGGCA CCGTCGACGG TGGTGCGGCC
ACGACCCCCG CGTCGGCCAC CGGCAGCGCC GCTCCCTCGG CTTCTCCGTC GCTCGGCGCC
GGCAGCTCCA GCGGAGGCGG CGCGTCGCCC GGCGGCGGCC TGAGCACTCT GCCGACCTCG
CTCCTCGGCT CGCCCCGCTC GTCCGGATCG GGCAAGGGTT CCTCCGCCAC GGCGCAGACC
GCGAGCGCGC GGAGTACCCG GGGCGCCTCC GACACCAAGG GCGGGGTGGC GATCCGCCTG
CCCGACGGTT CGGTGGTGAA GGCCCCGAAC GCCAAGGCGG CAGCAGCGGT GCAGGCCGCA
CTCACCCAGA TTGGCGTGCC CTACGCGTGG GGCGGTACCT CGCCGGGCGT CGGGCTCGAT
TGCAGCGGAC TGACCCAGTT CGCCTACCGG CAGGCCGGGA TCGAGCTGCC CCGGATCGCC
GTGGATCAGG TGGTGGGCGC TCAGGTGAGC GCGTCGAATC TGCAACCCGG TGACCTGGCC
GTCTGGGACG GCCACGTCGC AATGGTGGTG GGCAACGGGC TGATGGTCGA GGCGGGCGAC
CCGGTCCAGC TGTCGTCGAT CCGCACCGAC AACATCGGCC AGGGATTCCA CGGCTTCTGG
CGGCCCACCG GCTGA
 
Protein sequence
MNAIVQALAA PLRTLLDAFG SGDLTTGGVD AAIAAIQSEL DRISAQTRST NVTVGQSWTG 
QDAGAAQRSI GSGGVSALAL AQHTGSIKES VTVAAEKVRG GQAELRRILD SFLQQAEAAD
PSLANPGGLI AVLTLAADHV QQALDVLTKV RGELDDETGK VSELAANTPT APGTVDGGAA
TTPASATGSA APSASPSLGA GSSSGGGASP GGGLSTLPTS LLGSPRSSGS GKGSSATAQT
ASARSTRGAS DTKGGVAIRL PDGSVVKAPN AKAAAAVQAA LTQIGVPYAW GGTSPGVGLD
CSGLTQFAYR QAGIELPRIA VDQVVGAQVS ASNLQPGDLA VWDGHVAMVV GNGLMVEAGD
PVQLSSIRTD NIGQGFHGFW RPTG