Gene Tpau_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0975 
Symbol 
ID9155115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp997285 
End bp998100 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003645947 
Protein GI296138704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATG TCGAGAGCCC TCCGGTGCTG GTCGCTGCGG GCAATGCGGT CCACGGTGTG 
GTTCGCGACG TCGACGTCTT CCAGCTTCCG GACCTGTGGG CTTTTCACCT GTACTCGTAC
GCGGCCGAGC TGCTGATCGA TGGTGTGAGC TATCAGATCA GGCCCGGCGC CGTCTCCCTG
GTGCCGCCGG GGGCGGTCAC CGAGTATCGC TATCGGGGGC CGAGTCGGCA CCGCTACGTG
CACTTCTCGG CGCCCGCGGA CGCCGATCCG GAGCACGGCC CTGGTGCGCC GCTCGTCGTG
CCTCTCGGCC CGGAATATCC CGCGATCGAC GAGAACTTTC GCCTCGCGGT CGCGAACGCG
ATACTCCGGC CCGAGCGCAG CGCCGCGGAG ATCTGGATCG CCTTGCATCG AGTGCTCGAC
CGGGCGGTTT CGGCGGGCGC ACCTGCCAAC GACCCGGTCG ATCATGTCGC GCAGGCGCTG
TCGATCATCG AGGCGCGTCT GCAGGATCGG CTCACGGTGG CCGGCATCGC GGCGGAAGTG
GGGATTTCGC ATACCCATCT GACTCGCTTG TTTCGTGCCG AGACGGGACG CACCGTGATC
GGCTACGTGC GTCACCGCCG GATCGAGCGC GCGGTGCACC TGTTGCGTCA CACCACGATG
CCGATCGCAG CGGTGGCGGC CACCGTCGGG TTCGACGATC CACAGGCCTT CAACAAATCA
TGCCGGGTCG AGAGCGGCCT GTCTCCGCGC GGCGTTCGCG CCGGCGTGGC CCCTGATGCC
GCTACTCCTG CGCCACCGGG ATCGTCACCC AGCTGA
 
Protein sequence
MLNVESPPVL VAAGNAVHGV VRDVDVFQLP DLWAFHLYSY AAELLIDGVS YQIRPGAVSL 
VPPGAVTEYR YRGPSRHRYV HFSAPADADP EHGPGAPLVV PLGPEYPAID ENFRLAVANA
ILRPERSAAE IWIALHRVLD RAVSAGAPAN DPVDHVAQAL SIIEARLQDR LTVAGIAAEV
GISHTHLTRL FRAETGRTVI GYVRHRRIER AVHLLRHTTM PIAAVAATVG FDDPQAFNKS
CRVESGLSPR GVRAGVAPDA ATPAPPGSSP S