Gene Tpau_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0940 
Symbol 
ID9155080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp965235 
End bp965813 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content62% 
IMG OID 
Productprotein of unknown function DUF308 membrane 
Protein accessionYP_003645912 
Protein GI296138669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.315068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCA ACAACCCCCT GCAGCAGGGC ATCAAGAGCA CCTGGCAGAC CACGCTGTTC 
CTGGGCATCG TGTCGATCAT CATGGGCGCG ATCATCGCGG TATGGCCGGG TCCGACCACG
TTGGTCGTCG GCGTCCTGTT CGGCATCTTC TTGATCCTCA CCGGCATCTT CCAGGTGATC
GCCGGCCTCA TCGGGGAAGC CCAGCACCGG GTGCTCGCGG TGATCAGCGG CGCACTGTCG
CTGATCCTGG GCGCCTTCTG CTTCCGCGAT GACATCTACA ACTCGATCGC CGTACTCGGG
ATCTGGATCG GTATCAGCTG GATCTTCTTC GGCATCACGT CGATCACGAT CGGATTCGCC
AACAAGTCGC TGCCGAACCG CGTGTGGGTC GTGATCCTCG GCATCCTCAC CGCCGTGGGC
GGTTTCGTGC TGGTCTCCTA TCCGTACGAG GTGCAGATCC TGGTGCTGAT CTCCGGTATC
TGGGCCATCG CGATCGGCAT CGTCGAGGTG ATCTCGGCGT TCCAGCTGCG CAGCGCGGCG
AACAAGTTCG AGCAGCGCGT GTCCGACTTC GTGAGCTGA
 
Protein sequence
MTTNNPLQQG IKSTWQTTLF LGIVSIIMGA IIAVWPGPTT LVVGVLFGIF LILTGIFQVI 
AGLIGEAQHR VLAVISGALS LILGAFCFRD DIYNSIAVLG IWIGISWIFF GITSITIGFA
NKSLPNRVWV VILGILTAVG GFVLVSYPYE VQILVLISGI WAIAIGIVEV ISAFQLRSAA
NKFEQRVSDF VS