| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0932 |
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| Symbol | |
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| ID | 9155072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 953218 |
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| End bp | 956499 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003645904 |
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| Protein GI | 296138661 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.966242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTGGA GTAACGGGCC CAGCTGGGCG GAGATGGAGC GGGTGCTCTC GGGGCGTGCC
CCGGCGCGAC GTGAGGAGCC TCCGGGTGAC GGCGGCGATT CACCGGCGTG GTCGCGTAAG
CGTGAGCCCT ACGTACCGGG GGAGGGCGGT CCGGGTGCCT CCCGTGTTCC CTACGCTGAG
TTGCACGCGC ACACCGCGTT CAGCTTCCTC GATGGCGCGG CGCAGCCCGA GGAGATGGTC
GAACAAGCGC ACGCGCTCGG TCTCACGGCG CTCGCCGTCA CCGACCACAA CGGCTTCTAC
GGGGTGGTGC GATTCGCGGA GGCCGCGCTC GGGCTGGGTG TTCCCACGGT GTTCGGTGCC
GAACTCTCGC TGCTGCGCGA TGCGGAACGT ACCGGCACCG CCGACCCCGA CGGCGAGCAC
CTGCTCGTGC TCGCCCGGGG CCAGGAGGGC TATCGCCGTC TGTCCCGCGC CATGGCCGAG
GCGCATATGG AAGCGGGCGA GAAGGGGAAA CTGCGCTTCC ATCCGGACCG TCTGGCCGAA
TGGTCGGAAG GGCACTGGCA CATCCTCACC GGCTGCCGCA AGGGTGCCGT CCGGCGCGGG
CTCGACGCCG CCGGACCCGA CGGTGCCGCC GGTGCGCTCG CGCACCTGTT GGACCGGTTC
GGTCCCGACC GGGTCAGCAT GGAACTCACG GTGCACGGCG TCCCCGAAGA CGACGAGCGC
AACCATCTCC TCGCCGGGGT CGCCGCCCGG ATGGGAGTGG GCACCGTCGC CACCACGGGA
GCCCACTTCG CGCGACCCGA TCAGCGGCGC CTCGCCGCCA CCCTCGCCGC GATCCGGGCC
CGTCGCAGCC TCGATGAACT CGACGGCTGG CTGCCCGCGG CCGGCGGAGC GCACCTGCGC
TCCGGCGACG AGATGGCGCT GCTGCTCCCG GAGCATCCCG GAGCCATCGC GGGAGCGGTG
GAACTCGCCG CCGAATGCGC CTTCAGCCTC AGGCTGATCG CGCCGAACCT GCCGCCCTTC
GATGTGCCGG CGGGGCATAC CGAGGCCACC TGGCTGCGCG AGCTCACGCG GCGCGGCGCC
CTCGACAGAT ACGGTCCGCC GGAGTCGAAT CCGAAGGCGT ACCGCCAGAT CGAGCACGAA
CTGAACGTCA TCGAGACCCT CACCTTCCCC GGCTACTTCC TCATCGTGCA CAGCATCGTG
AGCTTCTGCC GGGAGAGCGA CATTCTCTGT CAGGGGCGCG GCAGCGCCGC GAACTCCGCC
GTGTGCTTCG CGCTCGGCAT CACCGCGGTC GATCCCGTCC GCAACGGCCT GCTGTTCGAA
CGCTTCCTCG CACCGGAACG CGACGGCCCG CCCGATATCG ACGTCGACAT CGAGTCCGAT
CGTCGCGAGG AGGCGATCCA ATTCGTCTAC CGCACGTACG GGCGCGCATA CGCGGCGCAG
GTAGCCAACG TGATCACCTA CCGTGGCCGG TCCGCGGTGC GCGATACCGC TCGTGCGCTC
GGCTACTCCC AGGGGCAGCA GGACGCCTGG AGTAAGCAGA TCTCCAGCTA CGGCTGGCGC
AATGATCCGG TGCCCGACGG GGTGCCGGAG CGGGTGATCG ATCTGGCGAC ACAGATCGCG
GATCTGCCTC GGCACCTGGG CATCCACTCC GGTGGCATGG TGATCTGCGA CCGACCCATC
GCCGATGTGT GCCCCACTGA GTGGGCTCGG ATGCAGGACC GTAGCGTGCT GCAGTGGGAC
AAGGACGACT GCGCCGCCGC AGGCCTGGTG AAGTTCGACC TGCTCGGTCT CGGCATGCTC
AGTGCCCTGC ACTATGCGCA GGATCTGCTC AAGGAGCACA AGGGGATCGA GGTCGATTTC
GCCCAGCTCG ACCTCACCGA CGATACGGTC TACGCGATGC TCCGGCGCGC TGATTCCGTG
GGGGTCTTCC AGGTCGAGTC GCGGGCTCAG ATGGCCACCC TGCCGCGGCT CAAACCGCGA
ACCTTCTACG ATCTGGTGGT CGAGGTCGCC CTCATCCGGC CCGGACCCAT CCAGGGCGGT
TCGGTGCACC CGTACATCCG CCGCCGTAAC GGGCAGGAGG AACCGCGGGT CGAGCATCCA
TCGATGTGGA AGACCCTCGA ACGCACGCTG GGTGTTCCCC TGTTCCAGGA GCAGCTCATG
CAACTCGCCG TCGACGTCGC CGATTTCACT CCGGCCGAGG CGGATCAGTT GCGCCGCGCC
ATGGGCTCCA AACGCTCCAC CGAAAAGATG GAACAGCTCC GCGAGCGGTT CTACCGGGGT
GCCAAACAGT TGCACGGTAT CGAGGGTGAA CTGGCCGATC GCATCTTTGA GAAGCTGGCG
GCGTTCGCGA ACTTCGGTTT CCCCGAAAGT CATTCGCAGT CATTCGCATC GCTGGTGTTC
TACTCGTCGT GGTTCAAGTG CTATCACCCC GCGGCCTTCT GTGCCGCTCT GCTGCGGGCG
CAGCCGATGG GCTTCTACTC GCCGCAGTCC CTGGTGGCCG ATGCCCGGCG GCACGGCGTC
ACGGTGCACG GCCCTGACCT GAACATCAGC CTGCCGTGGG CGAACCTGGA GAACGCAGGG
ATGGAGGTAC GGCTGGGGCT CGCGGCGATC CGCACCATCG GCGATGAACT GGCCGAGCGC
ATCGTTGCCG AACGGGAGGC GGGAGGCATC TACGCGGGTC TTACGGACCT CACCTCCCGG
GTGGAACTCA CTGTGGCACA GGCTGAGGCG CTCGCCACCT CCGGCGCACT CGACTGCTTC
GGGCGTGACC GGCGGCAGGC GCTGTGGGAG GCCGGTGCCG CAGCCCGCGA GCGCCCGGAT
CGCCTGCCCG GCACCGCCAC CGCAGGCGCA CCGCCCACCT TGCCGGGGAT GAGCGAGACC
GAGCTGGCGG CTGCGGACGT CTGGGCCACC TCGGTCACCG TCGGCAAGTA TCCCACCGAG
TTCCTGCGCC CGAAGCTCGA CGAGCTCGGG GTCATCCCCG CCGATCAGCT GCTGTCCCTG
CCCGACGGTG ACCGGGTCCT CGTCGGTGGG GCCGTGACGC ACCGGCAGCG CCCCGCCACC
GCTGGTGGCG TCACCTTCAT CAATCTCGAA GACGAGACCG GCATGGTGAA CGTCGTGTGT
AGTCAGGGGC TGTGGGCCCG GTACCGGCGG CTCGCGCAGT CCGCCCCGGC GTTATTGATC
CGGGGGAAAC TGCAGAACGC CGAGGGTGCG GTCACCGTGG TCGCGGATCG TTTGCAACGC
ATGGACCTGT CGGTGCCATC GCGCTCTCGG GACTGGCAGT AG
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| Protein sequence | MGWSNGPSWA EMERVLSGRA PARREEPPGD GGDSPAWSRK REPYVPGEGG PGASRVPYAE
LHAHTAFSFL DGAAQPEEMV EQAHALGLTA LAVTDHNGFY GVVRFAEAAL GLGVPTVFGA
ELSLLRDAER TGTADPDGEH LLVLARGQEG YRRLSRAMAE AHMEAGEKGK LRFHPDRLAE
WSEGHWHILT GCRKGAVRRG LDAAGPDGAA GALAHLLDRF GPDRVSMELT VHGVPEDDER
NHLLAGVAAR MGVGTVATTG AHFARPDQRR LAATLAAIRA RRSLDELDGW LPAAGGAHLR
SGDEMALLLP EHPGAIAGAV ELAAECAFSL RLIAPNLPPF DVPAGHTEAT WLRELTRRGA
LDRYGPPESN PKAYRQIEHE LNVIETLTFP GYFLIVHSIV SFCRESDILC QGRGSAANSA
VCFALGITAV DPVRNGLLFE RFLAPERDGP PDIDVDIESD RREEAIQFVY RTYGRAYAAQ
VANVITYRGR SAVRDTARAL GYSQGQQDAW SKQISSYGWR NDPVPDGVPE RVIDLATQIA
DLPRHLGIHS GGMVICDRPI ADVCPTEWAR MQDRSVLQWD KDDCAAAGLV KFDLLGLGML
SALHYAQDLL KEHKGIEVDF AQLDLTDDTV YAMLRRADSV GVFQVESRAQ MATLPRLKPR
TFYDLVVEVA LIRPGPIQGG SVHPYIRRRN GQEEPRVEHP SMWKTLERTL GVPLFQEQLM
QLAVDVADFT PAEADQLRRA MGSKRSTEKM EQLRERFYRG AKQLHGIEGE LADRIFEKLA
AFANFGFPES HSQSFASLVF YSSWFKCYHP AAFCAALLRA QPMGFYSPQS LVADARRHGV
TVHGPDLNIS LPWANLENAG MEVRLGLAAI RTIGDELAER IVAEREAGGI YAGLTDLTSR
VELTVAQAEA LATSGALDCF GRDRRQALWE AGAAARERPD RLPGTATAGA PPTLPGMSET
ELAAADVWAT SVTVGKYPTE FLRPKLDELG VIPADQLLSL PDGDRVLVGG AVTHRQRPAT
AGGVTFINLE DETGMVNVVC SQGLWARYRR LAQSAPALLI RGKLQNAEGA VTVVADRLQR
MDLSVPSRSR DWQ
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