Gene Tpau_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0895 
Symbol 
ID9155035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp913848 
End bp914909 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003645868 
Protein GI296138625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACG AGCTGAGTCG GCGTTCCCTC CTCCGCTTCG CCGCCGGAAC GACCGCTGCG 
GTCGGTATGG CCGGATTCGC CGGCACGGCC GCGGCGGCGC CCACCGGGCT GCGGGTGCTC
ACGATCAACA CCTGGATGAA CGGCACCAAG GTGCCGGACG GGCTGAACCG GGTCGCAGCG
GTGATCCGTC AGGTCGACGC CGATATCGTG CTGCTGTCCG AGGCCAAGAC GGCGACCGCC
GATCTGGTGC CGCTGCTCGC CGCGGCCGGC GCTACCTATC ATCGCGCCAC GTCGAGCGAT
CCCGGCGTCC TGTCCAAGTT CCCGATCGCT TCCGCCGGCA CCCTGCCGGG GATGGCGAAG
GCGGTGATTC CGCTGGGGGA CAAGACCCTG GTCGCCTACG CGGCGCATCT CGAATACCGC
TGGTACGCAA CATATCTGCC GCGCGGATAC GGTGCCGGCG TGCCCTCCGG AGAGTTCTCC
GAGTTCGGCT GGAACAAGAT TCCCGGCGGT CCGGTGACCG ATGTCGCCGC CGTGCAGCGG
TGCAACGACG CCTCGGGACG GCCGGGCGTG ATCGACCGCT TCCTCGCCGA TGCGGAAGCC
GAACGCGCCC GCGGCCGTAT GGTGCTGTTG GGCGGAGACT TCAACGAACC CTCGGCCCTC
GACTGGACCA CAGGAACGAA GGACCTCTAC GACCACAACG GGACCGTCGT ACCGTGGGGG
TCCACCGCGA AGCTGGCCGC CGCCGGCTAT GTCGATGCCT ACCGCAGCAC CTTCCCGGAC
CCCGCCACCC ACCCCGGATT CACGTGGCCG GCGAGCAATG CCGACGCGCC GGTCAGTTCC
CTGACCTGGG CGCCCGATGC CGATGAGCGC GACCGCATCG ACTACCTGTT CAGCTCGCCG
GGGTCCGGCC TGCGGGTCAC CGGCGCAGGC ATCGTCGGCC CGCGCGCGTC GATCGTGCGA
AGCAAGCGGG TGGACGAGCC GGAGGCCGGG GAGTTCACCG CCAACCCCAC CCCGTGGCCC
ACCGATCACA AGGCAGTGCT GGCCACCTAC GCCGTGGGCT GA
 
Protein sequence
MNHELSRRSL LRFAAGTTAA VGMAGFAGTA AAAPTGLRVL TINTWMNGTK VPDGLNRVAA 
VIRQVDADIV LLSEAKTATA DLVPLLAAAG ATYHRATSSD PGVLSKFPIA SAGTLPGMAK
AVIPLGDKTL VAYAAHLEYR WYATYLPRGY GAGVPSGEFS EFGWNKIPGG PVTDVAAVQR
CNDASGRPGV IDRFLADAEA ERARGRMVLL GGDFNEPSAL DWTTGTKDLY DHNGTVVPWG
STAKLAAAGY VDAYRSTFPD PATHPGFTWP ASNADAPVSS LTWAPDADER DRIDYLFSSP
GSGLRVTGAG IVGPRASIVR SKRVDEPEAG EFTANPTPWP TDHKAVLATY AVG