Gene Tpau_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0867 
Symbol 
ID9155007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp880873 
End bp882087 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_003645840 
Protein GI296138597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAACCGA TTTACGTCGG CGTCGACATC GGAAAGCGGT TTCACCACGC GTGCGTCATC 
GACGCTACGG GAAGCGTTCT GCTGAGCAGG CAGGTGCTCA ACAGCGAGAG CGACTTGAAC
GCGATCGCCG CCGAAGTCGA ACGGCAAGCT GAAGGTGCAG CGGTTTGGGT GATCGACGTT
GTCTCGGAGA TCTCGGCGCT GTTGCTGGCG ATCCTCGCCG CACGTGAGGT TGCCCATGTG
GTGCGGTATG TACCGGGCGC GGCCGTATCG GCGATGTCGA AATCCTTTGT CGGTGAGGGT
AAAACCGACG CCAGAGACGC GAAGGTTATC GCGGAGCTCG GTCGCCTACG ACGATCTCTG
AGGACAGTGT CTCTGCGTGA TGATGCGACA GCGGCATTGA CAACGCTGAC TTCCTATCGA
TCTGACCTAG CCGCAGAGTG GGTCGCCAAC ATCAACAGGC TCCGCGCAAT CCTGACCAGT
ATCTTTCCTG GTCTGGAACA GCAGCTTGAC CTGTCGACCA AATTCCCGCT GATCCTCGTC
TCGATGTTCT GCACGCCCAC CGCCGTGATC GAGGCCGGCG AAAAGGGCGT CCACGAGGCT
TTGCTGACCG CCGGGGTCTA CCGGAACTCC GCTGCACGCC TAGCCGCGGC CGCGATGGAG
TCGGCCAGGC ATCAATCCGT TCGTGGAGCT GGAGAGAGTG ATATCGCAGC TCTTACAATG
CGATTGGCCT CCCGGCTGCT GTTGCTTCTC GATGAACGGA AGCTGCTCGA CAAGCAGATC
GCTGAGTTGT TCCGACAGCA TCGCCATGCT GCCCTGATTG AGTCGATTCC AGGACTCGGA
CCGCAACTCG GCGCCGAGCT ATTGGTCTGT CTCAACGGTG ATATCCGGAA CTTTGCCAAC
GCCGGCAAAC TCGCCTCTTA CGCTGGTTTG GTGCCGGTCC CGCGCGATTC AGGCCGAATA
TCGGGGAACA TGCGTCGGCC GCGCCGCTAC AATCGAAGAT TGCGTCGTGT CTTCTACCTC
GCGGCCATGA CCAGCCTGAA AGACCCCGAT AGTAGGTCGC GCCAGTATTA CGACCGAAAA
CGATCGGAGA ATCGCACGCA TACGCAGGCG ACACTGGCGC TCGCGCGCCG TCAAGTTGAT
GTCCTGTGGG CGGTACTACG CGACGAGCGC CCTTACACCG GGGCCGCGCC GGAGGGCGCC
GTCATGGCCG CTTGA
 
Protein sequence
MQPIYVGVDI GKRFHHACVI DATGSVLLSR QVLNSESDLN AIAAEVERQA EGAAVWVIDV 
VSEISALLLA ILAAREVAHV VRYVPGAAVS AMSKSFVGEG KTDARDAKVI AELGRLRRSL
RTVSLRDDAT AALTTLTSYR SDLAAEWVAN INRLRAILTS IFPGLEQQLD LSTKFPLILV
SMFCTPTAVI EAGEKGVHEA LLTAGVYRNS AARLAAAAME SARHQSVRGA GESDIAALTM
RLASRLLLLL DERKLLDKQI AELFRQHRHA ALIESIPGLG PQLGAELLVC LNGDIRNFAN
AGKLASYAGL VPVPRDSGRI SGNMRRPRRY NRRLRRVFYL AAMTSLKDPD SRSRQYYDRK
RSENRTHTQA TLALARRQVD VLWAVLRDER PYTGAAPEGA VMAA