| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0864 |
|---|
| Symbol | |
|---|
| ID | 9155004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 874399 |
|---|
| End bp | 875892 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | secretion protein snm4 |
|---|
| Protein accession | YP_003645838 |
|---|
| Protein GI | 296138595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.375848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TGGTGGAGGG CACGGAAACC GAGGTCGCAC GGCTGAGTCG AGTGTCGGTG
CTGTGCGGGG GCGCGCAGGT CGACGTCTCA CTGCCGCTAC AGACGCCGAC CGAGGTGCTG
ATCCCGGAGC TGGTGCGACT GTTCGGCGAC CGGATCTCGG GGACGGCGGA ATCGGCGTGG
GCGCGGCCGT GGCGGCTGGC ACCGGTCGGC GGAGATCCCC TGCCGGGTCC GCAGACGCCC
TCGGACGCCG GGATCACCGA GGGCGATCTG CTGGTGTTGT TCGTCGCCGA GGCACCGCCG
CCGCCCGCGG TGTTCGACGA TGTCTTCGAT ACCGCCGCCA CCGACCTCGA CACGGGTCTG
CGGTGGAATG AGAAGGCCGC GATGATCGTC GGCCTGATGG TGCTGGCCGG TGCCACCCTC
GCCACGGCGG CGGTGGCGCT GCGCCTGGGC CTCGCACCGC GCGGCGAATC CGGCGCCCGG
CCCGCGGTGG GTGCGATCTT CGCCCAGCTG TGGACCGCCG GCGGTGCGTT ACTCCTGCTG
GTCGGTGCGG GTACCGCGGT GCGACGGATG CGCGAGAGCG GTCCGGTGCC CACGGCACTG
GCCGCCTGCG CGACGGTCCT CTCCGCTGCC GCCGGGGCGC TGGCGGTGCC GCTCGGGATG
GACGGTCGGT ACGGGCCGCC ACACGCCCTG CTCGCGGTGG TCGCCGCCGC GGTGACGGCG
GTGGTGGCGC TGCGGATCAC CGGACGCGGC GCGGTGGTGC ACATCGCCGT GATGACCGCG
GCCGCGATCG CGGCGCCCGC CTTGTTCGCC GCACTGTGGC TGCCCGGCCG GCGGGCCGCG
CTGGCCGCGA CGGTGGCGGT GATCGCGTAC GTGGTGATCA CCTTCGCGGC CCGGATCGGC
GCCTCGGTCG CCAAGATGCC GCTGCCGCGG GTGCCCGCGG CGGGCGAGCG GATCGACCCG
ATCGATGATG AGCCGCCCGC CACGGTCGCC GGAGTCGGCG CCGTCGCGGT GGGCCTGAGC
GAGGAGGCCG CGGCTCCGCC GCGCACCGGA TACGCGCAGG AGGTGTGCTC CGGGATCACC
GTGGGCGCCG CGGTCGCCGG TTCGGTCGCA GCGCTGCTGG TGGACGCCGC CGCCCGGGAA
GTCCCGCTGC ACCACATCGC TTTCGCCGCG GTGATCGCCG TGGCCTACTG CTTGCGCGGG
CGCACCCACG GCGACCCGAT CCAGGCCGGC GCCGTGATCC TCGGCGGCGC GGCCGTCGCG
ATCGGCACCG CCACCAGTCT CGCGTGGGGC TACGGCGTAT GGCCGGTGCT GGGCCTGCTG
ACGCTCGCCG CGATCGCCGG GATCGCGGTC GCCTGCGGGG TGGCGGCGCC GCGAATCACG
TTCAGCCCCA TTCAGCGTCG GTGCGCTGAG CTCGGTGAGT ACCTCACGAT CGCCGCGGCG
GGGCCGCTGC TGGGCTGGGT GTGGGACGTG TACGCCACCG TCCGGAACCT CTGA
|
|---|
| Protein sequence | MTDLVEGTET EVARLSRVSV LCGGAQVDVS LPLQTPTEVL IPELVRLFGD RISGTAESAW
ARPWRLAPVG GDPLPGPQTP SDAGITEGDL LVLFVAEAPP PPAVFDDVFD TAATDLDTGL
RWNEKAAMIV GLMVLAGATL ATAAVALRLG LAPRGESGAR PAVGAIFAQL WTAGGALLLL
VGAGTAVRRM RESGPVPTAL AACATVLSAA AGALAVPLGM DGRYGPPHAL LAVVAAAVTA
VVALRITGRG AVVHIAVMTA AAIAAPALFA ALWLPGRRAA LAATVAVIAY VVITFAARIG
ASVAKMPLPR VPAAGERIDP IDDEPPATVA GVGAVAVGLS EEAAAPPRTG YAQEVCSGIT
VGAAVAGSVA ALLVDAAARE VPLHHIAFAA VIAVAYCLRG RTHGDPIQAG AVILGGAAVA
IGTATSLAWG YGVWPVLGLL TLAAIAGIAV ACGVAAPRIT FSPIQRRCAE LGEYLTIAAA
GPLLGWVWDV YATVRNL
|
|---|
| |