Gene Tpau_0853 details

Gene Information

• Locus tag: Tpau_0853
• ID: 9154993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 863919
• End bp: 864590
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 71%
• Product: regulatory protein TetR
• Protein accession: YP_003645827
• Protein GI: 296138584

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0137644
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTCC AACGGGCTCG CAGCGAGGAG CAGCGCCTGC AGCGCCGTGA GTCGATCCTG 
GCCGCGGCCG ATGCGATGCT CGCCGAGATG CCCGTTGCCG AGATCACCCT TACCGGGCTC 
AGTCGGCGGG TAGGGCTGGC GAAGTCGAAT GTGTTGCGCT ACTTCGAGTC CCGTGAGGAC 
GTCCTGCTTG AACTGCTGGT CCGGTCGGCG CGCGACTGGG TGGCCGAGCT CGGCGCGGCG 
GCAGCAGCCG CGATCGATCC GGCGGCTCCC GTGGACGATC GGGTCGACCG CATCGCCGCA 
CTCTTCGCCG GCAGTGCCGC CGACCATCCC GGCCTGCTCG ACCTCCTATC CGCGCAGGCC 
GGTGTGCTCG AACAGAACGT CTCCGCCGAA GCCGTGCTGC GGTTCAAGCG GGCCGTTCTC 
ACGGTGATGA CGGACCTGGC GACCGTGTTG CGCACCGCGA TTCCCGAACT CGGCGACGGT 
GCGCTTGCGC TCTGCGCGAT GGCGGTGTCG ATCGCCGGCG CCCTCTACGC CCAGGCACGG 
CAGTCCGAGG CCTGTGCCGC TGCCTACCGT GCCGATCCGG CGCTCGCCGT CTTCCGCACC 
GACCTGGTGC CTGCGCTCAC CGGGGCCTTC GCCACCCTGA TCTCCGGCGC CCTCGCCCGC 
GCCGGCCGCT GA 

 

Protein sequence

MSFQRARSEE QRLQRRESIL AAADAMLAEM PVAEITLTGL SRRVGLAKSN VLRYFESRED 
VLLELLVRSA RDWVAELGAA AAAAIDPAAP VDDRVDRIAA LFAGSAADHP GLLDLLSAQA 
GVLEQNVSAE AVLRFKRAVL TVMTDLATVL RTAIPELGDG ALALCAMAVS IAGALYAQAR 
QSEACAAAYR ADPALAVFRT DLVPALTGAF ATLISGALAR AGR