| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0843 |
|---|
| Symbol | |
|---|
| ID | 9154983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 853207 |
|---|
| End bp | 854673 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | permease for cytosine/purines uracil thiamine allantoin |
|---|
| Protein accession | YP_003645817 |
|---|
| Protein GI | 296138574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC CGGTAACCGC ACAGACTGAT TCGACGCTGA TCAATGCCGA CCTGGCCCCC
ACGACCAAGG AGAACGCCAC CTGGAAATCG TGGGACCTGT TCTGCCTGTG GATGACATCG
GCGCACAGCC TCGGCAGCTA CGGCTTCGCC GTCGGCATGC TGGCACTGGG CCTGACCGGC
TGGCAGACGG TGCTCGCCCT GTTCGTGGGT GTGCTGATGC TCTGGGGCGG ATCGAACCTG
ATCGGGGTGG CCGGGCAGAA GGTGGGGGTG CCGTTCCCGG TATTCGCCCG GGCCACCTTC
GGGATCTTCG GTGCCAACAT TCCCGCGCTG CTGCGCGGAC TGGTCGCCGT GTTCTGGTAC
GGCATCCAGA CCTACCTGGC GGCGCTCGCG GTGATCGCGC TGATCGTCCG GATCTGGCCC
TCCACCGAGG CGTGGACGCA CGGCGGCTTC CTCGGACAGA GTCCCCTCGG ATGGGCCGTC
TTCATGAGCC TGTGGGTGGT GCAGCTGATG ATCCTGTCCT ACGGAATGGA CATCGTCCGC
CGGGTCTCGG ACTTCGCCGG GCCGGTGGTC TGGATCGGGA TGTTCGCGCT GGCCCTGTGG
ATGCTCGATA AGGCCGATTG GAGCATCGAC TGGAACGCGC GGGCCGGCTC GCCGCTGTCC
GGGCCGAGCA CCGTGGCGGC CTTCGTCGCC GTCGCCTTCC TGATGGTGGC GTTCATGGCG
GGGCCGCTGG TGAACTACGC CGACTTCGCC CGGTTGTCCC CGTCCACGCG GGCCATCAAG
CGGGGCAACG CCCTCGGCAT TCCGCTCAAC GAGACCGCCT TCGTGTTGAT CTCCCTGGTG
ATCTCGCTCT GCTCGCTGAA GGTCTTCGGT GACAGCTCGA AGGACCCGGT GTCGCTGGTG
TCGGAGATCG ACTCCGACGT GATCGTGGTG ATCGCCGCGC TGCTCTTCGC GATCGCGACG
GTCGGTATCA ACGTGGTGCT CAACTTCGTC TCGCCCTCCT ACGACATCAG CAACGTCGCG
CCCAAGTACA TCTCCTTCCG CATGGGAGGC ATCATCACCG CGGTCCTCTC GATCGTGGTG
CTGCCCTGGA AGGTCTGGGG GAGCGAGGCT GCAGTGGTGT ACTTCCTCGG CGGGGTCGGT
GCGCTGATGG GACCGGTCTT CGGCATCCTG GTCGTCGACT ACTACCTCAT CCGCAGGCAG
GGCACCCGCA TCGCGGACCT GTACTCGACC CGGCCCGACG GCACGTACTA CTTCGTGCGC
GGCGTCAATC CCGCGGCCGT CGCCGCTCTC GCGATCTCCG GCGTCGTGGC GGTGGTGATC
GCCCTGGTAC CCGACTCGCA GTACGTGACG GCCCTGAGCT GGCCGATCGG TGCGACCCTC
GGCGCGGTGC TGGTGTTGGT ACTCACCCCG GTTCTCGGCC GCGGTTCCCG GGCGCCGAGC
CCCGAGGCGG TTGCGGCCGA GCGCTGA
|
|---|
| Protein sequence | MSEPVTAQTD STLINADLAP TTKENATWKS WDLFCLWMTS AHSLGSYGFA VGMLALGLTG
WQTVLALFVG VLMLWGGSNL IGVAGQKVGV PFPVFARATF GIFGANIPAL LRGLVAVFWY
GIQTYLAALA VIALIVRIWP STEAWTHGGF LGQSPLGWAV FMSLWVVQLM ILSYGMDIVR
RVSDFAGPVV WIGMFALALW MLDKADWSID WNARAGSPLS GPSTVAAFVA VAFLMVAFMA
GPLVNYADFA RLSPSTRAIK RGNALGIPLN ETAFVLISLV ISLCSLKVFG DSSKDPVSLV
SEIDSDVIVV IAALLFAIAT VGINVVLNFV SPSYDISNVA PKYISFRMGG IITAVLSIVV
LPWKVWGSEA AVVYFLGGVG ALMGPVFGIL VVDYYLIRRQ GTRIADLYST RPDGTYYFVR
GVNPAAVAAL AISGVVAVVI ALVPDSQYVT ALSWPIGATL GAVLVLVLTP VLGRGSRAPS
PEAVAAER
|
|---|
| |