| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0790 |
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| Symbol | |
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| ID | 9154930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 805025 |
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| End bp | 806476 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003645765 |
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| Protein GI | 296138522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.124129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCGC TGCGGCGGCT GCTCGCCGCT CTGTTCGCCG TCCTCGTGGT GGCCGGTCCG
TTGCCGGCCA ACGCCGCACC CCCGCTACCG GACCCGGGCG TGCTGCGGGT GGGTACCGAG
GGGGTCTACC AGGTGTACAG CTACCACGAC TCCGCAGACC GGCTCACCGG CTACGACGTG
GAGATGATCA CCGCGATCGC CCAGAAGATC GGCTGGCGGG TGGAATTCGT GGAGACCCCG
TGGGATTCGA TGATGGCCGC ACTCGAAGCG AACCGCTTCG ACCTGGTGGC CAATCAGGTG
ACCTTCAGTG CCGAACGCGC CGCCAAGTAC GAGCTCTCCG ATCCGTATCT GCAGACCGGC
GGTTCGGTCC TGGTACGTAA GGACGACAAC AGCATCGACT CGCTCGACGA TCTGCGGGGC
CGAACAGCCG CGCAGAGCAT CACCAGTAGC TGGTCGGGCG TCGCCGAGAA GGCGGGCGCG
AAGGTCGAGG CGGTCAACAG CTTCACCGAT GCCGTCAACG TGCTGGCGGC GGGCCGGGTC
GACGCGGTGG TCAACGACAC CGGCGTGGTA CGCAATTACC TCGCCGTCAA TCCGCGCGCA
CCGGTGAAGA TCGCGGCCCA GACACCGGAC AGGTCGCAGT CGGTGTTCGC GGCTCGCAAG
GGCGCCGGGA TCATGCCCGA GATCAACCGC GGTCTCGCCG AGATCCGTGC GGACGGTACG
GCCGAACGCA TCTCGCAGAA GTACTTCGGT GAACAGGCCG AGAAGGACAG CAAGGCTGCG
GCAGGCGCCC AGAGCACCTG GGACATGGTG CGCCGCAATC TGGTCCCGAT GGCGAAGGCC
ACCGTCACCA CCACCATCCC GCTCACGGCG ATCAGCTTCG TGATCGGGCT CGCGATCGCG
CTCGGCGTGG CGCTCGCCCG GATGTCGAAG CGTAGGGCGG TACGGGGCCT GGCTCGCGCG
TACATCTCGA TCATCCGCGG TACACCCCTG CTCGTGCAGT TGGTGATCAT CTTCTACGGC
CTCCCGCTCG CGGGGGTGGT GATCGATCCG TTCCTCGCTG CGGCGGTCGC CTTCTCGCTC
AACGTGGGCG GCTACGCGGC CGAGATCATC CGCGCGGCGA TCGGCGCGGT GCCGCGCGGG
CAGTGGGAGG CGGCCACCAC CATCGGCATG GACTATCGGA CCGCGCTGCG CCGGATCATC
CTGCCGCAGG CCGCACGCAC GGCCACCCCG CCGCTGGCGA ACACGCTGGT CTCCCTGCTC
AAGGACACCT CACTCGCCTC GGCGATCCTG GTGACCGAGC TGTTCCGGAC GGCGCAGATC
GCCGCCGCGC CCACCTACGA CTTCTTCGTC ATGTACGTGG TGGCCGCCTG CTACTACTGG
GTGATCTGCC AGGTGCTCAG CCTCGTGCAG ACCCGGCTCG AGACCCGATT CGAAAGGTAC
GTGGCGCGAT GA
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| Protein sequence | MRSLRRLLAA LFAVLVVAGP LPANAAPPLP DPGVLRVGTE GVYQVYSYHD SADRLTGYDV
EMITAIAQKI GWRVEFVETP WDSMMAALEA NRFDLVANQV TFSAERAAKY ELSDPYLQTG
GSVLVRKDDN SIDSLDDLRG RTAAQSITSS WSGVAEKAGA KVEAVNSFTD AVNVLAAGRV
DAVVNDTGVV RNYLAVNPRA PVKIAAQTPD RSQSVFAARK GAGIMPEINR GLAEIRADGT
AERISQKYFG EQAEKDSKAA AGAQSTWDMV RRNLVPMAKA TVTTTIPLTA ISFVIGLAIA
LGVALARMSK RRAVRGLARA YISIIRGTPL LVQLVIIFYG LPLAGVVIDP FLAAAVAFSL
NVGGYAAEII RAAIGAVPRG QWEAATTIGM DYRTALRRII LPQAARTATP PLANTLVSLL
KDTSLASAIL VTELFRTAQI AAAPTYDFFV MYVVAACYYW VICQVLSLVQ TRLETRFERY
VAR
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