| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0754 |
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| Symbol | |
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| ID | 9154894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 769249 |
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| End bp | 773205 |
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| Gene Length | 3957 bp |
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| Protein Length | 1318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003645730 |
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| Protein GI | 296138487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG TTAACTTCTT CGACGAACTG AAGATCGGTC TGGCGACCGC CGATGACATC
CGTAACTGGA GCTACGGCGA GGTCAAGAAG CCCGAGACCA TCAACTACCG CACGCTCAAG
CCCGAGAAGG ACGGCCTGTT CTGCGAGAAG ATCTTCGGAC CTACTCGAGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG TGTCCGCTTC AAGGGCATCA TCTGCGAGCG CTGCGGCGTC
GAGGTCACTC GCGCCAAGGT GCGTCGTGAG CGGATGGGCC ACATCGAGCT CGCGGCTCCG
GTCACCCACA TCTGGTACTT CAAGGGCGTT CCCTCGCGCT TGGGCTACCT GCTGGACCTG
GCGCCCAAGG ATCTCGAGAA GATCATCTAC TTCGCCGCCT ACGTGATCAC GGAGGTCGAC
GAGGAGCAGC GGCACAACGA GCAGTCCACG CTCGAGGCCG AGATCGAGTC CGAGAAGAAG
GTCCTCGCGG ACCAGCGGGA CGTCGATCTG GAGAACCGCG CCAAGAAGCT GGAGGACGAT
CTGGCCGTCC TCGAGGCCGA GGGTGCCAAG GCCGACCAGC GCCGCAAGGT CAAGGACGGC
GGCGAGCGGG AGATGCGGCA GATCCGCGAC CGCGCGCAGC GTGCCATCGA CGAGCTCGAC
GAGATCTGGA CGACCTTCGT CAAGCTCGCG CCGAAGGACA TGATCGTCGA CGAGAAGCTC
TACCGTGAGC TGCAGGACCG CTACGGCGAG TACTTCAAGG GCGCCATGGG TGCCGAGGCG
ATCAAGAAGC TCATCGAGAA CTTCGACATC GATGCCGAGG CCGAGATCCT GCGCGAGGTC
ATCCGCAGCG GCAAGGGCCA GAAGAAGCTG CGTGCGCTCA AGCGACTGAA GGTCGTGGCG
GCGTTCCAGC AGTCGGGCAA CTCGCCGCTG GGCATGGTCC TGGACGCGGT GCCGGTGATC
CCGCCGGAGC TGCGCCCGAT GGTCCAGCTC GACGGTGGCC GGTTCGCCAC GTCCGACCTG
AACGACCTGT ACCGCCGTGT GATCAACCGC AACAACCGCC TCAAGCGACT GATCGATCTG
GGTGCGCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TGCAGGAGTC GGTCGACGCA
CTGTTCGACA ACGGCCGTCG TGGCCGTCCG GTCACCGGAC CGGGCAACCG CCCGCTGAAG
TCGCTGTCCG ATCTGCTCAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTCGGTAAG
CGCGTGGACT ACTCGGGCCG TTCGGTGATC GTCGTGGGTC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CGAAGCTGAT GGCGCTCGAG TTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTGGATCTGA ACCACGCGCA GAACATCAAG TCGGCCAAGC GCATGGTCGA GCGGCAGCGC
CCGCAGGTGT GGGACGTCCT CGAAGAGGTC ATCGCCGAGC ACCCCGTGCT GCTCAACCGT
GCTCCCACGC TGCACCGCCT GGGCATCCAG GCGTTCGAGC CGCAGCTCGT GGAGGGCAAG
GCCATCCAGC TGCACCCGCT CGTTTGTGAG GCCTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCCGTGC ACCTCCCGCT GTCCGCGGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG
TCCTCGAACA ACATCCTCTC GCCCGCGTCG GGTCGTCCGC TCGCCATGCC CCGTCTGGAC
ATGGTGACCG GCCTGTACCA CCTGACCACC GAGAAGGCCG ATGCGCAGGG CGCCTACACG
GCGGCCAAGA AGGATCAGCC GGAGACGGGT GTCTACTCGA GCCCGGCCGA GGCCATCATG
GCGGTCGACC TGGGCGAGCT GTCGATCCAG GCGCCGATCA AGGTGCGGCT GACGAACCAG
CGTCCGCCGG CCGAGATCGA GGCCGAGCAG TTCGACGGTG CGTGGGAGCG CGGTCAGGCC
TGGACGGCCG AGACCACGCT GGGCCGGGTG CTGTTCAACG AGCTGCTGCC GATCGACTAC
CCGTTCGTCG ACGAGCAGAT GCCGAAGAAG CGTCAGGCCG TGATCATCAA CGATCTGGCC
GAGCGGTACC CGATGATCGT GGTGGCGCAG ACCGTCGACA AGCTCAAGGA CTCCGGTTTC
TACTGGGCCA CGCGGTCCGG TGTCACGGTC TCGATGTCCG ACGTGCTCGT TCCGCCGAGC
AAGAAGGAGA TCCTCGATCG CTACGAGGAG CGGGCCGACG GTATCGAGCG CAAGTACGCC
CGCGGTGCCC TCACCTCGGG TGAGCGTCGC GACGCCCTCG TCGAGATCTG GAAGCAGGCC
ACCGACGAGG TCGGTAAGGC GATCGACGAT TACTACCCCG AAGACAACCC GATCACGATG
ATCCCGAAGT CGGGTGCCAC GGGCAACATG ACCCAGGTGC GGAACCTGGC CGGCATGAAG
GGCCTGGTGA CGAACCCGAA GGGTGAGTTC ATCCCGCGCC CGATCAAGTC GTCCTTCCGC
GAGGGCCTCA CGGTGTTGGA GTACTTCATC AACACCCACG GTGCTCGTAA GGGTCTGGCC
GATACCGCGC TCCGTACCGC CGACTCGGGT TACCTGACCC GTCGTCTGGT GGACGTCTCG
CAGGACGTCA TCGTCCGCGA GACCGACTGC AACACCACCC GTGGCATCAT CGTGCCGCTG
GCCGAGGTGC AGGCCGACGG TTCGCTGATC CGCGATGCGC ACGTCGAGAC CTCGGCGTAC
GCCCGCACCC TGGCCGAGGA CGCCAAGGAT GCCAAGGGCA ACGTCATCGT CGAGCGCGGT
CACGACCTGG GTGATCCCCA GATCGAGGCC CTGCTCGAGG CCGGCATCGC CGAGGTGAAG
GTGCGCTCCG TGCTCACCTG CACCACCGGC ACCGGCGTGT GCGCCACCTG CTACGGCCGC
TCGATGGCCA CCGGCAAGCT CGTCGACATC GGCGAGGCCG TCGGTATCGT CGCCGCGCAG
TCGATCGGTG AGCCCGGTAC CCAGCTGACC ATGCGTACCT TCCACCAGGG TGGCGTCGGT
GACGACATCA CCGGTGGTCT GCCGCGAGTC ACCGAGCTGT TCGAGGCCCG TGTCCCCAAG
GGCAAGGCTC CGATCGCCGA GGTCTCCGGC CGCATCCGCC TGGAGGACGA CGACCGGTTC
TACACGATCA CCATCACGCC GGACGACGGC AGCGAAGAGG TCGTGTACGA CAAGATCAGC
AAGCGTCAGC GCCTGCGTGT GTTCAAGCAC GACGACGGCA CCGAGCGTCT GCTGGCCGAC
GGTGACCACG TGCAGGTGGG TCAGCAGCTC CTCGAGGGCG CTGCCGATCC GCACGAGGTG
CTGCGCGTCA TGGGCCCGCG TCAGGTGCAG GTGCACCTGG TCAACGAGGT CCAGGAGGTG
TACCGGTCGC AGGGTGTGTC GATCCACGAC AAGCACATCG AGACCATCGT GCGGCAGATG
CTGCGTCGCG TGACGATCAT CGACTCGGGT TCCACGGAGT TCCTGCCCGG TTCGCTCACC
GAGCGTGCCG AGTTCGAGGC CGAGAACCGT CGCGTCGTGG CCGAGGGCGG CGAGCCCGCG
GCCGGCCGTC CGGTGCTCAT GGGCATCACC AAGGCCTCGC TCGCGACCGA TTCGTGGCTG
TCGGCGGCCT CCTTCCAGGA GACCACCCGC GTGCTCACGG ACGCCGCGAT CAACACCCGC
TCCGACAAGC TGGTGGGCCT CAAGGAGAAC GTCATCATCG GTAAGCTCAT CCCGGCCGGT
ACGGGTATCA ACAAGTACCG GAACATCCAG GTGCAGCCCA CCGAGGAGGC CCGCGCGGCC
GCGTACTCGG TGCCGACCTT CGACGATCAG TACTACGGTC CGGAGGGTGC GTTCGGCGCC
CCGTCCGGCG CCGCGGTGCC GCTCGACGAC TACGGCTTCT CCGACGGCTA CCGGTGA
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| Protein sequence | MLDVNFFDEL KIGLATADDI RNWSYGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVITEVD EEQRHNEQST LEAEIESEKK VLADQRDVDL ENRAKKLEDD
LAVLEAEGAK ADQRRKVKDG GEREMRQIRD RAQRAIDELD EIWTTFVKLA PKDMIVDEKL
YRELQDRYGE YFKGAMGAEA IKKLIENFDI DAEAEILREV IRSGKGQKKL RALKRLKVVA
AFQQSGNSPL GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR
PQVWDVLEEV IAEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GRPLAMPRLD MVTGLYHLTT EKADAQGAYT
AAKKDQPETG VYSSPAEAIM AVDLGELSIQ APIKVRLTNQ RPPAEIEAEQ FDGAWERGQA
WTAETTLGRV LFNELLPIDY PFVDEQMPKK RQAVIINDLA ERYPMIVVAQ TVDKLKDSGF
YWATRSGVTV SMSDVLVPPS KKEILDRYEE RADGIERKYA RGALTSGERR DALVEIWKQA
TDEVGKAIDD YYPEDNPITM IPKSGATGNM TQVRNLAGMK GLVTNPKGEF IPRPIKSSFR
EGLTVLEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVRETDC NTTRGIIVPL
AEVQADGSLI RDAHVETSAY ARTLAEDAKD AKGNVIVERG HDLGDPQIEA LLEAGIAEVK
VRSVLTCTTG TGVCATCYGR SMATGKLVDI GEAVGIVAAQ SIGEPGTQLT MRTFHQGGVG
DDITGGLPRV TELFEARVPK GKAPIAEVSG RIRLEDDDRF YTITITPDDG SEEVVYDKIS
KRQRLRVFKH DDGTERLLAD GDHVQVGQQL LEGAADPHEV LRVMGPRQVQ VHLVNEVQEV
YRSQGVSIHD KHIETIVRQM LRRVTIIDSG STEFLPGSLT ERAEFEAENR RVVAEGGEPA
AGRPVLMGIT KASLATDSWL SAASFQETTR VLTDAAINTR SDKLVGLKEN VIIGKLIPAG
TGINKYRNIQ VQPTEEARAA AYSVPTFDDQ YYGPEGAFGA PSGAAVPLDD YGFSDGYR
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