Gene Tpau_0753 details

Gene Information

• Locus tag: Tpau_0753
• ID: 9154893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 765706
• End bp: 769218
• Gene Length: 3513 bp
• Protein Length: 1170 aa
• Translation table: 11
• GC content: 67%
• Product: DNA-directed RNA polymerase, beta subunit
• Protein accession: YP_003645729
• Protein GI: 296138486

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGTCT CCGTCTCCAG CCAGACTCAG AACGATCAGA ACGCCGTGGT CCCCGGGGCC 
CCGAAGCGCG TCTCGTTCGC GAAGCTCTCC GAGCCGCTCC CGGTACCCGG TCTACTCGAT 
GTGCAGACCG ACTCCTTCGA GTGGCTCGTG GGCTCCCCGG AATGGCGTGA GAAGGCCGCG 
TCGCGTGGCG AGGCCAACCC GACCGGCGGC CTGGAGGACA TCCTCGCGGA GCTTTCGCCG 
ATCGAGGACT TCTCCGGTTC CATGTCGCTC TCCTTCTCCG ACCCGCGCTT CGATGAGGTC 
AAGGCCTCCA TCGAGGAGTG CAAGGACAAG GACATGACGT ACGCGGCACC GCTGTTCGTC 
ACCGCCGAGT TCATCAACAA CAACACCGGC GAGATCAAGT CGCAGACCGT CTTCATGGGT 
GATTTCCCGA TGATGACGGA CAAGGGCACC TTCATCATCA ACGGCACCGA GCGCGTGGTC 
GTCTCGCAGC TGGTCCGTTC GCCCGGTGTG TACTTCGACG AGACCATCGA CAAGTCCACC 
GAGAAGCCGC TGCACAGCGT CAAGGTGATC CCGGCCCGCG GCGCGTGGCT CGAGTTCGAC 
GTCGACAAGC GCGACACCGT GGGCGTGCGC ATCGACCGCA AGCGTCGTCA GCCCGTCACC 
GTGCTGCTCA AGGCGCTCGG CTGGACCAGC GAGCAGATCC TCGAGCGCTT CGGCTTCTCC 
GAGATCATGC GTTCCACGCT CGAGAAGGAC GCCACCGCCG GCACCGACGA GGCCCTCCTC 
GACATCTACC GCAAGCTCCG TCCGGGCGAG CCGCCCACGA AGGAGTCGGC GCAGACCCTG 
CTGGAGAACC TGTTCTTCAA GGAGAAGCGC TACGACCTGG CCCGCGTCGG CCGGTACAAG 
CTGAACAAGA AGCTGGGCCT GCCCGCGAAC GCGGACGGCA CCCAGTCCTA CGTGCTCAAC 
GAGGACGACA TCGTCGCCAT CGTCGAGTAC CTGGTGCGCC TGCACGACGC CCCGTCGGAG 
CAGCTGACCT ACATGACGGT GCCGGGTGGC GTCGAGGTGC CGGTCGAGGT CGACGACATC 
GACCACTTCG GCAACCGTCG CATCCGCACC GTGGGCGAGC TGATCCAGAA CCAGCTCCGG 
GTGGGCCTGT CCCGCATGGA GCGCGTGGTC CGCGAGCGCA TGACCACGCA GGACGTCGAG 
GCGATCACCC CGCAGACCCT GATCAACATC CGCCCGGTCT CGGCGGCGAT CAAGGAGTTC 
TTCGGTACCT CGCAGCTCTC GCAGTTCATG GATCAGAACA ACCCGCTGTC GGGTCTGACC 
CACAAGCGTC GCCTCAACGC GCTCGGCCCC GGTGGTCTCT CGCGTGAGCG CGCGGGCCTC 
GAGGTCCGTG ACGTCCACCC GTCGCACTAC GGCCGCATGT GCCCGATCGA GACCCCTGAG 
GGCCCGAACA TCGGCCTGAT CGGCTCGCTG TCGGTGTACG CGCGGGTCAA CCCGTTCGGA 
TTCATCGAGA CGCCGTACCG CAAGGTGACC GACGGTGTCG CGACGGACGA GATCGTCTAC 
ATGACCGCCG ATGAGGAGGA TCGCTTCTAC ATCGCGCAGG CCAACGCCGC GACCGACGAC 
AAGGGCCGTC TCACCGACGA CCGCGTGCTG GTCCGTAAGC GCGGCTCCGA GGTGGAGTTC 
GTGTCCACCG CGCAGGTCGA GTACATGGAC ATCTCGCCGC GCCAGATGGT CTCGGTCGCC 
ACCGCGATGA TTCCGTTCCT CGAGCACGAC GACGCCAACC GTGCCCTCAT GGGTGCGAAC 
ATGCAGCGTC AGGCCGTGCC GCTGGTCCGT TCCGAATCGC CGCTGGTCGG CACCGGTATG 
GAGCTGCGCG CCGCGGTCGA CGCGGGCGAC GTCATCATCA CCGAGAAGGC GGGCGCCGTC 
GAGGAGGTGT CGGCCGACTT CATCACCGTG ATGGCGGACG ACGGCACCCG CAAGACGCAC 
CGGCTGCGGA AGTTCGCGCG CTCGAACCAG GGCACCTGCG CGAACCAGCG TCCGATCGTC 
TCCGCGGGTC AGCGGGTCGA GATCGGCCAG GTTCTGGCCG ACGGCCCCTG CACCGACAAC 
GGCGAGATGG CTCTCGGTAA GAACCTGCTC GTGGCGATCA TGCCGTGGGA GGGTCACAAC 
TACGAGGACG CGATCATCCT GTCGCAGCGC CTGGTGGAGG AGGACGTGCT CACGTCCATC 
CACATCGAGG AGCACGAGAT CGATGCCCGC GACACCAAGT TGGGCGCCGA GGAGATCACC 
CGGGACATCC CGAACGTCTC CGACGAGGTC CTGGCGGACC TGGACGAGCG CGGCATCATC 
CGCATCGGTG CGGAGGTCCG CGACGGCGAC ATCCTGGTCG GCAAGGTCAC CCCGAAGGGC 
GAGACCGAGC TGACCCCCGA GGAGCGCCTG CTCCGCGCGA TCTTCGGTGA GAAGGCGCGC 
GAGGTGCGCG ACACCTCGCT GAAGGTGCCC CACGGCGAGA CCGGCAAGGT CATCGGCGTC 
CGCGTGTTCT CGCGCGAGGA CGACGACGAG CTGGCCCCGG GCGTCAACGA GCTGGTCCGC 
GTGTACGTGG CCCAGAAGCG CAAGGTGCAG GACGGCGACA AGCTCGCCGG CCGCCACGGC 
AACAAGGGCG TCATCGGCAA GATCCTGCCC GCCGAGGACA TGCCCTTCCT GCCCGACGGC 
ACCCCGGTCG ACATCATCCT CAACACGCAC GGCGTGCCGC GGCGTATGAA CATCGGCCAG 
ATCCTGGAGA CGCACCTCGG GTGGGTCGCC AAGACCGGCT GGGATGTGCG CGACGAGAAG 
GGGAACATCC CCGAGTGGGC ATCGCAGCTG CCGGAGCAGA TGTACGCCCA GCCGAGCGAC 
ACCAACACCG CCACCCCGGT GTTCGACGGT GCCCGCGACG AGGAGCTGGC CGGCCTGCTC 
GGCTCGACGC TGCCCAACCG TGACGGCGAC GTCATGGTCG GCGCCGACGG CAAGGCGACC 
CTGTTCGACG GTCGCTCGGG CGAGCCCTTC CCGTACCCGG TCGCGATCGG CTACATGTAC 
ATCCTCAAGC TGCACCACCT GGTCGACGAG AAGATCCACG CTCGTTCCAC CGGTCCGTAC 
TCGATGATCA CGCAGCAGCC GCTGGGTGGT AAGGCGCAGT TCGGTGGTCA GCGCTTCGGT 
GAGATGGAGT GCTGGGCGAT GCAGGCGTAC GGCGCCGCCT ACACCCTGCA GGAGCTGCTC 
ACCATCAAGT CGGACGATGT GGTCGGCCGC GTGAAGGTGT ACGAGGCGAT CGTCAAGGGC 
GAGAACATCC CCGAGCCGGG TATCCCGGAG TCGTTCAAGG TGCTTCTCAA GGAGCTGCAG 
TCGCTCTGCC TGAACGTCGA GGTGCTGTCG AGCGACGGTG CCGCGATCGA GATGGCCGAC 
AGCGACGACG AGGATCTCGA GCGCGCTGCT GCCAACCTCG GCATCAACCT CTCGCGCAAC 
GAGAACGCCT CGGCCGAAGA CCTCGCGAAC TAG 

 

Protein sequence

MAVSVSSQTQ NDQNAVVPGA PKRVSFAKLS EPLPVPGLLD VQTDSFEWLV GSPEWREKAA 
SRGEANPTGG LEDILAELSP IEDFSGSMSL SFSDPRFDEV KASIEECKDK DMTYAAPLFV 
TAEFINNNTG EIKSQTVFMG DFPMMTDKGT FIINGTERVV VSQLVRSPGV YFDETIDKST 
EKPLHSVKVI PARGAWLEFD VDKRDTVGVR IDRKRRQPVT VLLKALGWTS EQILERFGFS 
EIMRSTLEKD ATAGTDEALL DIYRKLRPGE PPTKESAQTL LENLFFKEKR YDLARVGRYK 
LNKKLGLPAN ADGTQSYVLN EDDIVAIVEY LVRLHDAPSE QLTYMTVPGG VEVPVEVDDI 
DHFGNRRIRT VGELIQNQLR VGLSRMERVV RERMTTQDVE AITPQTLINI RPVSAAIKEF 
FGTSQLSQFM DQNNPLSGLT HKRRLNALGP GGLSRERAGL EVRDVHPSHY GRMCPIETPE 
GPNIGLIGSL SVYARVNPFG FIETPYRKVT DGVATDEIVY MTADEEDRFY IAQANAATDD 
KGRLTDDRVL VRKRGSEVEF VSTAQVEYMD ISPRQMVSVA TAMIPFLEHD DANRALMGAN 
MQRQAVPLVR SESPLVGTGM ELRAAVDAGD VIITEKAGAV EEVSADFITV MADDGTRKTH 
RLRKFARSNQ GTCANQRPIV SAGQRVEIGQ VLADGPCTDN GEMALGKNLL VAIMPWEGHN 
YEDAIILSQR LVEEDVLTSI HIEEHEIDAR DTKLGAEEIT RDIPNVSDEV LADLDERGII 
RIGAEVRDGD ILVGKVTPKG ETELTPEERL LRAIFGEKAR EVRDTSLKVP HGETGKVIGV 
RVFSREDDDE LAPGVNELVR VYVAQKRKVQ DGDKLAGRHG NKGVIGKILP AEDMPFLPDG 
TPVDIILNTH GVPRRMNIGQ ILETHLGWVA KTGWDVRDEK GNIPEWASQL PEQMYAQPSD 
TNTATPVFDG ARDEELAGLL GSTLPNRDGD VMVGADGKAT LFDGRSGEPF PYPVAIGYMY 
ILKLHHLVDE KIHARSTGPY SMITQQPLGG KAQFGGQRFG EMECWAMQAY GAAYTLQELL 
TIKSDDVVGR VKVYEAIVKG ENIPEPGIPE SFKVLLKELQ SLCLNVEVLS SDGAAIEMAD 
SDDEDLERAA ANLGINLSRN ENASAEDLAN