| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0729 |
|---|
| Symbol | |
|---|
| ID | 9154865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 746317 |
|---|
| End bp | 747963 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | thiamine pyrophosphate protein TPP binding domain protein |
|---|
| Protein accession | YP_003645705 |
|---|
| Protein GI | 296138462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG CCGTACCCAA CCCGTCCACG CTGCAGGCGC GGGTGATCGT GGACGAACTG
GTCCGTGGGG GCGTCACCGA CATCGTGCTC TGCCCGGGCT CGCGCAACGC GCCGCTCGCC
TTCGCCGTGC ACGCGGCCGA CGTCCGCGGT GACCTGCGGC TGCACGTACG GATCGACGAG
CGCACCGCGG GATTCCTCGC CGTCGGTATC GCGGCCGCCA CCCGGCGCCC CGTCGCCGTG
ATCATGACCT CCGGCACCGC GGTCGCGAAC CTGAGCCCCG CCGTCTACGA GGCCAACTAC
GCCCGTGTCC CGCTCCTGGT GATCAGTGCC AACCGGCCGT ACGAGCTGCT CGGCTCCGGG
GCTAACCAGA CCGTCGAACA GTTCGGCATC TTCGGTACCC AGGTGCGCGC CTGCCTGTCC
CTCGGTCTCG CCGAGCCCGG CCTGGACCGG AACTCCCAGT GGCGCAGTGC CGTCTGCCGC
GCCCTCGCCG CCGCCCGCGG TGCCCGCACC GGCAACGCCG GCCCCGTCCA GTTCGACATC
CCGCTGCGCG AACCCCTCGT CCCCGACGAT CCCTCGCCCG CCCTCGCTCA GGGACGGCCC
GACGGCGGCC CCTGGACGGT GGCCCCCGTC GCCACTCTCG ACGTGCCGTT GCCCATCGAC
CTGAGCCCGG ACACCGTGGT CATCTCCGGA CACGGAGCCG GCGCGAATCC GGCCCTCGCG
CACCTGCCGA CCGTCGCGGA ACCCACAGCG CCGCAGCCGA AGAACCCGCT GCACCCATGG
GCGCTGCCGC TGCTGCGGCC CCGGCAGGCC ATCATCTGCG GCCGGCCCAC CCTGCACCGC
GAGGTCAGCG CACTCCTCGC CGATCCCGGT GTCACCGTCT ACGCCGTCAC CACCGGGCCC
CGCTGGCCCG ACGTCTCCGG CAACGTCGCC GCCACCGGCA CCCGCGTGGT CCCCGTCGGC
GATCCCGACG AGGCCTGGCT CGCCCGCTGC GCCGAGGCCG ATCGTCTGGC CCGCGCCGCC
GTCACCGACG GCCTCGCCGC CGAACCCGTC ACCGGCCTGC ACGTGGCCCG CGCCGTCTGC
GCGGCACTGC GCCCCGGCGA CCAACTCGTG GTGGGTGCCT CCAACCCCGT GCGCGATGTG
GCCCTCGCCG GCGACGTCCC GCCCGGCGTC ACGGTCCTCT CCAACCGCGG CGTCGCCGGC
ATCGACGGCA CCGTGAGCAC CGCCGTCGGC GCGGCGCTCG CCGCGCCCGA CACCCGCACC
ATCGCCCTGA TGGGCGACCT CACCTTCGTG CACGACGCCT CCGGCCTGCT CATCGGGCCC
GAGGAGCCGC GGCCGCGCGA TCTCACCATC GTGGTGGCCA ACGACAACGG CGGCGGCATC
TTCAACCTGC TCGAACAGGG GGAGGAGCGG TACTCCGGCG CCGAGTACGA CGGTGCCGCC
GCCCGCGTCT TCGGCACCCC GCACGGCACC GACCTGGCCT CCCTCTGCGC CGCCTACGGC
ATCGACTACC GGCTCGCCGA GGTCGACGAC CTCGCCGCCA TCGCCGCCGA ACCCGGGATG
CGAGTGGTCG AGGTACGCAC CCAGCGGTCC GGTCTGCGCG CCCTGCACGC CGGCATGCGA
GCCCGGATCG CGGGGGACGG CCGGTGA
|
|---|
| Protein sequence | MQNAVPNPST LQARVIVDEL VRGGVTDIVL CPGSRNAPLA FAVHAADVRG DLRLHVRIDE
RTAGFLAVGI AAATRRPVAV IMTSGTAVAN LSPAVYEANY ARVPLLVISA NRPYELLGSG
ANQTVEQFGI FGTQVRACLS LGLAEPGLDR NSQWRSAVCR ALAAARGART GNAGPVQFDI
PLREPLVPDD PSPALAQGRP DGGPWTVAPV ATLDVPLPID LSPDTVVISG HGAGANPALA
HLPTVAEPTA PQPKNPLHPW ALPLLRPRQA IICGRPTLHR EVSALLADPG VTVYAVTTGP
RWPDVSGNVA ATGTRVVPVG DPDEAWLARC AEADRLARAA VTDGLAAEPV TGLHVARAVC
AALRPGDQLV VGASNPVRDV ALAGDVPPGV TVLSNRGVAG IDGTVSTAVG AALAAPDTRT
IALMGDLTFV HDASGLLIGP EEPRPRDLTI VVANDNGGGI FNLLEQGEER YSGAEYDGAA
ARVFGTPHGT DLASLCAAYG IDYRLAEVDD LAAIAAEPGM RVVEVRTQRS GLRALHAGMR
ARIAGDGR
|
|---|
| |