| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0718 |
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| Symbol | |
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| ID | 9154854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 736730 |
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| End bp | 737617 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | low-density lipoprotein receptor YWTD repeat protein |
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| Protein accession | YP_003645694 |
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| Protein GI | 296138451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.481919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG CAATTATCGC GCTCGGCGTG CGCAGCGCCG AAATCTTCCG GGTCACGCTC
GACGGTGCCG TCACCACCCT CCGGCGTGGC GCGCCGGGGG AGAGTCCCGA CGGCGTGGTC
GTGCTCGGCG ACCGCATGTA TTGGACCACT ATGGGGCGCC CCGTCGTCGA CCCGGACAAC
CCCGGTGAGG CCGGACTCGA TTACTCCGCC CGCAACGGCG GCGTCCACTC CGCGAACCTC
GACGGCACCG ATGTCCGCGA TCTCACCGCG CCCGGCGACA TCACCACCGG TAAGCAACTC
GCCACCGACG GCACCCGTCT CTACTGGGGC GACCGGGAGG GCTGCCGCGT GAGCCGGATC
GACCTCGACG GCTCCGGTCT CACCGAGCTG GTGATCAATC AGCCGCAACC CGACCGACGT
GCCGAATGTG TCGGCGTCGC CGTCGATCCC AGCCGCGGGT ACCTCTACTG GAGCCAGAAG
GGTCCGGCCA AGGGCGGCCG GGGCCGCATC CTCCGCGTTG GGCTCGACCT GCCCGCCGGC
GAGACCGCCG ACAACCGCAC CGATATCGAG GTGCTGTGGG ACGGACTGCC CGAACCCATC
GACCTCGACA TCGTGGGTGA CACGCTGTAC TGGACCGATC GCGGCGCCGC CCCGAATGGC
AACTCCCTCA ACCGGTCCCC GATTCCGGCG GCCGGCGCCG CGGGGAGCGA GCCGGAGGTC
CTCGCCACCG GTTTCCACGA GGCCATCGGA CTCATCGTCG ACGAGCAGCA CGATATCGCC
TACGTCTCCG ACCTCGGTGG CGGCATCCAC CGGGTAGTCC TGAGCACCGG CGACGTCGCC
CTGCTCGCCG ACCTCGGCAC CCCGATCTCC GGCATCACCC GCGCCTGA
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| Protein sequence | MTEAIIALGV RSAEIFRVTL DGAVTTLRRG APGESPDGVV VLGDRMYWTT MGRPVVDPDN
PGEAGLDYSA RNGGVHSANL DGTDVRDLTA PGDITTGKQL ATDGTRLYWG DREGCRVSRI
DLDGSGLTEL VINQPQPDRR AECVGVAVDP SRGYLYWSQK GPAKGGRGRI LRVGLDLPAG
ETADNRTDIE VLWDGLPEPI DLDIVGDTLY WTDRGAAPNG NSLNRSPIPA AGAAGSEPEV
LATGFHEAIG LIVDEQHDIA YVSDLGGGIH RVVLSTGDVA LLADLGTPIS GITRA
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