Gene Tpau_0678 details

Gene Information

• Locus tag: Tpau_0678
• ID: 9154814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 693496
• End bp: 695460
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 68%
• Product: acyl-CoA oxidase domain protein
• Protein accession: YP_003645654
• Protein GI: 296138411

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.546337
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCCC CGGCATCGTC GCCCGAACTG ACCGCAGCCC TGCGCACGAT CCTCGACGGC 
CGGTGGGCCG ATACGAGAGA CGTGGTGCGG GGCCAGATCC AGGACCAGGG CGTGGTTCCC 
CGCGCCGGCC TGAGTCTGGA CGACTACCGC GAGCTGGTGC TCGGACAGAT GAAACAGATG 
GTGCCGCTGG GCTTCCCGGC GGACGGCTTC CGCACCGAGC ACGGCGGCAC GGGTGATGTG 
GGTGCCGCGG TCACGGCGAT CGAGACCCTC GGCTACGGCG ATCTGTCGCT GATGGTGAAG 
GCCGGCGTGC AGTGGGGCCT GTTCGGCGGT GCGGTGGAGA ACCTGGGCAC CCGATACCAC 
CACGACACCT ATGTCCGCGG CCTGATCGAC CTGGACGTGC TCGGCTGTTT CGCCATGACC 
GAGACGGGCC ACGGCTCCAA TGTGCAGGAA TTGGAGACCA CGGCCACGTA CCTTCCGGAG 
ACCGGCGAGT TCGAGATCCA CTCCCCCACC TCCAGCGCAC GCAAGGACTA CATCGGTGGC 
GCGGGTAAGC ACGCCCGCTA CGCCGCGGTG TTCGCGCAGC TCATCACCGG CGGACCGGGC 
GAAGAACCCA CAGGCCGTGG CGTGCACTGC TTCGTGGTGC CGATCCGGGA CGCGAACGGC 
GACGACCTAC CGGGTGTCAC CACCTCGGAC TGCGGTTACA AGGGCGGCCT GCCCGGCGTC 
GACAACGGCC GGATCGTGTT CGACCGCGTA CGCATCCCGC GGGTCGATCT ATTGAACCGG 
TACGCCGACG TCGCGGACGA CGGAACCTAT TCCAGTCCCA TCGAATCCGA CAACCGTCGG 
TTCTTCACGA TGCTCGGCAC CCTGATTCGT GGCCGGGTCA CCGTGGGCGC CGCCGCTGGT 
GCCGCCGGCC GCCTCGGTAT CGCCCTGGCC ACCAAGTACG CGCTGGTCCG CCGGCAGTTC 
GATGCGCCCG GCGGCGATAA CGAACTCCTG CTGCTGGACT ACCGAACACA CCAACGACGG 
CTGCTTCCGC TGGTGGCGCG CGCGTACGCG TTCGCGTTGG CGCAGAACGA ACTCACGGCC 
GAACTGCACG AGCTGCAGAC CGCCGATCCC GACAGCATCG ATCCGGACTA CAGCCGCGAG 
ATCGAAGGCA AGGCTGCGGC GATCAAGGCC GGTCACACCC GGCTCGCGTC GGACGCGATC 
AGCGCGGCCC GCGAGGCTTG TGGTGGCGCC GGTTACCTAT CGGAGAATCG GCTTCCGTTG 
CTGCGCGGCG ACATCGACGT GTTCACCACG TTCGAGGGCG ACAATCTGGT GCTCACCCAA 
CTGGTCGCGA AGGAGCAGCT CACTGCCTAC GCTGCCGACG TCCAGGGCCT CGACGCCGTG 
GGCTGGGTGC GCTTCGTGGC GGAGATGGCC CGCGATGTGG TGCTGGAGAA GACCGCAGCG 
CGCCAGGTGG TGCAGACCCT GCTCGACGAC TCCAACGAGG ACACCGAGGA GAGCGATCTC 
ACCCACCCGG GCACCCAGCT GCGCCTGCTC CGCAACCGAG AGAATCACCT GCTGCGCACC 
GCAGCCGACC GGATGCGCCG CGCGAAGGAT CCCGACGAGG ACCCGCTCGA GGTGTTCACC 
GAGACCCAGG ACCACCTGAT CAAGGTGGGC GAGGCGCACA TCGAGCGGAT CGTGCTGGAG 
TCCTTCGTGG ACGTGATCAC CGACGTCACG GACCGCGAGA CCCGCGATGC GCTCAAACTG 
ATGCGCAACC TGTACGTGTA CTCGCTACTC GAGCGCGACC TGGGGTGGTA CCTGATGCAC 
CGCCAGGTGT CGGTGGAGCG GGCCAAGGCC ATCCGGCGCG GCGTGAACGA GTTGTGCGGC 
AAGGCCCGGC CGATCGCCGA GTCGCTGGTC GACGCCTTCG GCATTCCCGC GACGGCACTC 
GATGTTCCGA TGCTCGACCC GGCGAACAGC GTCGCCGTCC ACTAG 

 

Protein sequence

MSSPASSPEL TAALRTILDG RWADTRDVVR GQIQDQGVVP RAGLSLDDYR ELVLGQMKQM 
VPLGFPADGF RTEHGGTGDV GAAVTAIETL GYGDLSLMVK AGVQWGLFGG AVENLGTRYH 
HDTYVRGLID LDVLGCFAMT ETGHGSNVQE LETTATYLPE TGEFEIHSPT SSARKDYIGG 
AGKHARYAAV FAQLITGGPG EEPTGRGVHC FVVPIRDANG DDLPGVTTSD CGYKGGLPGV 
DNGRIVFDRV RIPRVDLLNR YADVADDGTY SSPIESDNRR FFTMLGTLIR GRVTVGAAAG 
AAGRLGIALA TKYALVRRQF DAPGGDNELL LLDYRTHQRR LLPLVARAYA FALAQNELTA 
ELHELQTADP DSIDPDYSRE IEGKAAAIKA GHTRLASDAI SAAREACGGA GYLSENRLPL 
LRGDIDVFTT FEGDNLVLTQ LVAKEQLTAY AADVQGLDAV GWVRFVAEMA RDVVLEKTAA 
RQVVQTLLDD SNEDTEESDL THPGTQLRLL RNRENHLLRT AADRMRRAKD PDEDPLEVFT 
ETQDHLIKVG EAHIERIVLE SFVDVITDVT DRETRDALKL MRNLYVYSLL ERDLGWYLMH 
RQVSVERAKA IRRGVNELCG KARPIAESLV DAFGIPATAL DVPMLDPANS VAVH