Gene Tpau_0643 details

Gene Information

• Locus tag: Tpau_0643
• ID: 9154779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 661578
• End bp: 662354
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 66%
• Product: hypothetical protein
• Protein accession: YP_003645619
• Protein GI: 296138376

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATCG GAGTTCAGCT TCAGCCCCAA CACTTCACCG AGTACCAGCA GCTCCGCGAC 
GCCGTCGCCA AGCTCGAGGA ACTCGGCGTG GACGTCGTGT ACAACTGGGA TCACTTCTTC 
CCGCTGTCCG GCGATCCCGA CGGCACCCAT CTCGAATGCT GGACCATGCT CGCCGCATGG 
GCCGAGCAGA CCTCCCGGGT GGAGATCGGC GCACTGGTCA CCTGCAACAG CTATCGCAAC 
CCCGATCTGC TCGCCGATAT GGCGCGCACC GTCGACCACA TCTCGAACGG GCGCCTGATC 
CTGGGCATCG GCTCGGGCTG GTTCCAGCGC GACTACGACG AGTACGGCTA CGAGTTCGGC 
ACCGCCGGTT CACGACTCGA CGACTTGGCC ACCGCGCTCC CGCGGATCAC CGAACGCTGG 
GCCAAGCTCA ACCCCAAGCC CACCCGTGAC ATCCCGATCC TGATCGGCGG TGGTGGCGAG 
AAGAAGACGC TGCCGCTCGT GGCCCAGTAC GCCTCGGTGT GGCACTACTT CGTGGACCTG 
GAGACCTACC GGCACAAGTC GGCCGTACTC GCCGACGCCT GCGCGAAGAT CGGCCGCGAT 
CCGAAGCAGA TCGCGCACAA CGTGGCGATT CCGCGCGGCT CCAGCGTCGA AGAGGCGATC 
GCCTTCGCCG ACGTGCTCGT CGCCGAGGGC GCCACGGAGT TCACCGCCGA GCTCGCCGCT 
CCCGAGTTCG ATTACACCGT GATCGAGGCC CTCCTCCGCT GGCGCGACGC GCAGTAG 

 

Protein sequence

MRIGVQLQPQ HFTEYQQLRD AVAKLEELGV DVVYNWDHFF PLSGDPDGTH LECWTMLAAW 
AEQTSRVEIG ALVTCNSYRN PDLLADMART VDHISNGRLI LGIGSGWFQR DYDEYGYEFG 
TAGSRLDDLA TALPRITERW AKLNPKPTRD IPILIGGGGE KKTLPLVAQY ASVWHYFVDL 
ETYRHKSAVL ADACAKIGRD PKQIAHNVAI PRGSSVEEAI AFADVLVAEG ATEFTAELAA 
PEFDYTVIEA LLRWRDAQ