Gene Tpau_0620 details

Gene Information

• Locus tag: Tpau_0620
• ID: 9154756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 640740
• End bp: 641402
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 66%
• Product: 3-oxoacid CoA-transferase, A subunit
• Protein accession: YP_003645597
• Protein GI: 296138354

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTGG AATTCGCTCG GAACCCGCTG GATGCGGTGC AGGGTGTGCG CGACGGTGCA 
ACGGTGATGG TGGGCGGTTT CGGCGACGCC GGCCAGCCCT TCGAGCTGAT CGACGCGCTT 
CTGGAAGGCG GCGCCGGCGA TCTGACCATC GTGAACAACA ATGCGGGCCA AGGTGACCGA 
GGCCTCGCAC TGCTGATCCA GAAGGGACGG GTCCGCAAGG TGATCTGCTC CTTCCCCCGA 
CAGAGCGATT CCTGGCACTT CGATGAGGCG TATCGCGCGG GGAGGATCGA CCTCGAACTC 
GTCCCGCAGG GAAACCTCGC CGAGCGGATC CGTGCCGCCG GTGCGGGCAT CGGCGGCTTC 
TTCACACCGA CCGGATTCGG AACGGTGCTG GCCGAAGGGA AGGAGACCCG GATCATCGAC 
GGCCGCGGAT ACGTCTTCGA GGCCCCGCTG CACGCCGATA TCGCGCTGAT CAAGGCACTC 
AAGGCCGACC GCGTGGGAAA CCTGGTGTAC CGGAAGACCG CCCGGAACTT CGGCCCGATC 
ATGGCGGCCG CCGCACGGCG CACCGTGGCC CAGGTGTCCG AGATCGTGCC CACCGGCGCG 
ATCGATCCGG AGGTCGTGGT GACGCCCGGC ATCTACGTGA ACACGATCGT GGAGGTGCAG 
TGA 

 

Protein sequence

MIVEFARNPL DAVQGVRDGA TVMVGGFGDA GQPFELIDAL LEGGAGDLTI VNNNAGQGDR 
GLALLIQKGR VRKVICSFPR QSDSWHFDEA YRAGRIDLEL VPQGNLAERI RAAGAGIGGF 
FTPTGFGTVL AEGKETRIID GRGYVFEAPL HADIALIKAL KADRVGNLVY RKTARNFGPI 
MAAAARRTVA QVSEIVPTGA IDPEVVVTPG IYVNTIVEVQ