Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0606 |
Symbol | |
ID | 9154742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 628840 |
End bp | 629814 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_003645583 |
Protein GI | 296138340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.158472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGGCA ATTCCCAGCG CCGCGGCGCG GTTCGCAAGT CCGGCACCAA GAAGGGGCAG GTCACCGGGT CGGGTGGCGT GCGGCGTCGC GGGCTCGAGG GCCGCGGCGC GACCCCGGCG GCGAAGGACC GTCCGTACCA CCCCGCGCAC AAGAAGGCCC GGGCCGCTGC CAAGGCGGCC GCGAACCCGC AACGCCGGCC GCAGAAGGTG GCCGGCCGCG CAGCCGAGGA CGGTCCCGAG TACGTGCTCG GCCGCAATCC CGTGGTCGAG TGCCTACGCG CGGACGTTCC CGCGACGGCG TTGTACGTGG CGGTCGGCGC TCAGAACGAC GAGCGGCTCA CCGAATCGGT GCGGATGGCC GCCGACAAGG GCATCTCGAT CCTCGAGGTG CAGCGGGCCG AGCTGGACCG GATGAGCGAG AACGGACTGC ACCAGGGCAT CGCCCTGCAG ATCCCGCCGT ACAGCTACGC GCACCCCGAA GATCTGCTGC GCCGCGCCGC CGACCGTGGC GAAGCCCCGA TGATCGTGGC CCTCGACAAC ATCACCGACC CGCGCAACCT GGGCGCGGTG ATCCGGTCGG CGGCCGCGTT CGGCGGGCAC GGCGTGGTCA TCCCGTCCCG ACGGTCCGCG GCCATCACCG CCGTCACGTG GCGCACCTCC GCGGGGGCCG CGGCGCGGCT GCCCGTTGCG CAGGCGCCGA ACCTGAACCG CACCCTGGCC GATTACGCCG CCGCGGGACT GCAGATCGTC GGCCTGGATG CCGGCGGCGA CGTGACGCTC GACGACTACC GCGCCGACAC CGGTGTGGTG GTGGTGGTCG GATCCGAGGG CAAGGGCCTC TCGCGCCTGG TCCGCGAGAA TTGCGACTCC ATTCTCTCCA TCCCCATTGC TTCCTCGGTG GAATCGCTCA ACGCATCGGT CGCGGCGGGC GTGGTCCTGG CGGACTTCGC ACGACAGCGA CGAAATCGAA ACTGA
|
Protein sequence | MAGNSQRRGA VRKSGTKKGQ VTGSGGVRRR GLEGRGATPA AKDRPYHPAH KKARAAAKAA ANPQRRPQKV AGRAAEDGPE YVLGRNPVVE CLRADVPATA LYVAVGAQND ERLTESVRMA ADKGISILEV QRAELDRMSE NGLHQGIALQ IPPYSYAHPE DLLRRAADRG EAPMIVALDN ITDPRNLGAV IRSAAAFGGH GVVIPSRRSA AITAVTWRTS AGAAARLPVA QAPNLNRTLA DYAAAGLQIV GLDAGGDVTL DDYRADTGVV VVVGSEGKGL SRLVRENCDS ILSIPIASSV ESLNASVAAG VVLADFARQR RNRN
|
| |