Gene Tpau_0588 details

Gene Information

• Locus tag: Tpau_0588
• ID: 9154724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 613691
• End bp: 614476
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 72%
• Product: DNA glycosylase/AP lyase, H2TH DNA-binding protein
• Protein accession: YP_003645565
• Protein GI: 296138322

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGAAG GCGACACCCT GCACAACCTG GCCGCGCGCC TGCGGCCGGT GCTCGCGGGG 
CGCGTGCTCA CGGGCTGCGA CCTGCGGGTG CCTCGGTACG CCACCGTCGA TCTGACCGGC 
CGCACCGTCG ACGATGTCAG CGCCCGCGGC AAGCACCTGC TGATCGCCGC CGGCGATCTG 
ACGCTGCACA GTCATCTGAA GATGGAGGGG CAGTGGCATG TGTACCGGCC CGGGGAGCGG 
TGGCGCAGGC CCGGGCACAC CGCCCGTGCG GTGCTCGCCG TGGACGGCGC GCAGGTGGTC 
GGTTTCTCGC TCGGCTTTCT GGAGGTCCTC CGCACCGCGG CGGTCGACGA TGCTCTCGCG 
CACCTCGGGC CCGATCCGCT TGGACCGCAA TGGGATCCGG AGCGTGCCGC GGAGAACCTC 
GCGGCCACAC CGGCGCGCCC CGTCGGCCTT GCGCTGCTGG ACCAGCGGAA CCTGGCCGGG 
ATCGGCAACG TGTACCGCAA CGAACTGTGC TTCGTGCGTG GAGTGCATCC CGCGATGGAG 
GTCGCGGCGT GCGGTGACCT CCGGGGCTGG GTCGACGATG CCGCGCGTCT GCTGCGAGCG 
AATGCCGGAC GGTCGGTGCG GGTGACCACG GGCGTCGACC GGAACGGTCT GCGGGCCTTC 
GTCTACGACC GCGCCCGGCG CCCCTGCCTG CGGTGCGGGA CCGCCATCAG CGCAGGTTCG 
CTGGGTGCGG ACGGGGAGGC CGAGCGGACC ATCTGGTGGT GTCCACGCTG CCAGGACGCC 
AACTAA 

 

Protein sequence

MPEGDTLHNL AARLRPVLAG RVLTGCDLRV PRYATVDLTG RTVDDVSARG KHLLIAAGDL 
TLHSHLKMEG QWHVYRPGER WRRPGHTARA VLAVDGAQVV GFSLGFLEVL RTAAVDDALA 
HLGPDPLGPQ WDPERAAENL AATPARPVGL ALLDQRNLAG IGNVYRNELC FVRGVHPAME 
VAACGDLRGW VDDAARLLRA NAGRSVRVTT GVDRNGLRAF VYDRARRPCL RCGTAISAGS 
LGADGEAERT IWWCPRCQDA N