Gene Tpau_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0566 
Symbol 
ID9154702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp594493 
End bp595434 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID 
ProductDomain of unknown function DUF2520 
Protein accessionYP_003645545 
Protein GI296138302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAGT TTCAGGACTC GCCTGATCTG TTGGCGGGCA TCCCCAATCC CCCCGCGCCG 
GCCAGGCTCT CCGTCGGCGT GGTGTCCGCG GGCCGGGTCG GAACCGCGCT GGGAGCCGCA
TTCGAGCGTG CCGGGCACAT CGTCACCGCA ACGGCCGCAC GGACGCACCG CTCCCGCACC
CGTGCCGGAC TACGGCTGCC GGAGGCCCGG ATCGAGACGC CCGCGGTGAT CGCCGAGAAG
GCCGAGCTGC TCATCCTGGC CGTACCCGAC ACCGACCTTC CCGCCCTGGT CGACGACCTG
GCCGTCGCGA TCAATCCCTC GGCGATCGTG CTGCACACCT CCGGCGCCCT CGGCGTGGGC
GTGCTCGCCC CGCTCGCCCG CCTCGGCTGC ACCACGATCG CCTTCCACCC CGCGATGACC
TTCGTCGACG ATCCCGAGGA CACCGCGCGG CTGGCCTCCA GCTGCATCGG GATCACCGCC
GCCGACGAAG TGGGTCACGC CGTCGGTCAG GCCCTCGCAC TCGAGATCGG TGCCGAGCCC
GTGCGGGTCC CCGAGATCTC GCGTCCGCTG TACCACGCCG CCCTCGCACA CGGTGCGAAT
CACCTGGTGG CGCTGGTCGA CGATGCCGTG CTCGCACTCC GCGCCGCACT CGCCGGCGGG
GTGGGTCTCG ATACCGTCGG GGGCCCGGAG GCCGGACTCG CCGAACGCGT CCTCGCTCCG
CTGGCACGCG CCGCCCTGGA CAACGCCCTC CGCACCGGAC CGGCTGCTCT CACGGGTCCC
GCCGCTCGCG GTGACGCCGA GGCGGTCGCC CGCCACCTCG CCGCGCTCGA CACCGTCGAT
CCCCTGATCA CCGACGCGTA CCGCGGCCAA TCCCGGAGGG CAGCAGCCCA GTCCGGTACC
TCAGCCATGA TCGATCCCGT CCTCGAGAAA GAAGACCGAT GA
 
Protein sequence
MPEFQDSPDL LAGIPNPPAP ARLSVGVVSA GRVGTALGAA FERAGHIVTA TAARTHRSRT 
RAGLRLPEAR IETPAVIAEK AELLILAVPD TDLPALVDDL AVAINPSAIV LHTSGALGVG
VLAPLARLGC TTIAFHPAMT FVDDPEDTAR LASSCIGITA ADEVGHAVGQ ALALEIGAEP
VRVPEISRPL YHAALAHGAN HLVALVDDAV LALRAALAGG VGLDTVGGPE AGLAERVLAP
LARAALDNAL RTGPAALTGP AARGDAEAVA RHLAALDTVD PLITDAYRGQ SRRAAAQSGT
SAMIDPVLEK EDR