Gene Tpau_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0565 
Symbol 
ID9154701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp593236 
End bp594381 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003645544 
Protein GI296138301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.420906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGATC CCGGCAATCG GAAGCGAGCC CCGCGTAGGT CCAACGCCGG TGCCGGGCAG 
TGGATGCTGG GTGCGGTGAT CGTGCTGGCC GTGGCCGGTA CCGGGATGTG GATCTTCTCC
GACGACAAGC GCTGGGGTCT TCTCGCCCTG ATACTGCTGG TCTGGGGTCT GGTGATCGCC
GCATTCCTGA TCGCTCGCAA CGCCCGCGAC ATCCGCTCGG CGGAGTCGAA GGAGAGCGGT
CTCAAGGCGG TCTACGAGCT CCAGCTCGAG CGCGAGATCT CCGCCCGGCG CGAATACGAA
CTGCAGCTCG AGCACGACCT GCGCTCCGAG CTGCGGCACG AGTCCAATGA AGAGCTCACA
GCACTCAAGG CAGAGGTGCT CGCGTTGCGC GCCAACCTCG AAGAGCTGTT GGGTCGCGAC
CTGGGCCCGT CGTACACCGA GCTGTACGCC GCCGCCGAGC AGCGCGCGAT CGACGCCCAG
CGCGCCAAGT CCGTGTTCGA AGACGACGAC CGATTCCGCG CGCAGCAGGA TTTCGCCGGC
GTGCCGCCCC CGGTGCCCGA CGTCGACAGC TACTACGGCG CCGCTTCCGC GGTGAACGAC
GTCCCGGACT TCCCGGCGGC CGCGGAGCAG CCCGTCGACG CGCCCTCCGC GCCGAACCGG
CCTCAGGAGG ACACGCCCAC CGCGGTCTTC GAGGCCGTCG TCGACCCGCA GTCGCCGGCC
GCTGCGCCGC CGGTCGATGC CGAGCCGGTC GACGTCGAGC ACATCGACCA CATCGACGGC
GACGAGCCCT TCGTCCCGCT GGCCCCGCAG TCCGGCTACC GCCCGCCCTT CCCTCCGCGC
CGGTTCACCC CGGATGCCGC GCAGCAGCAG CCGCCGCAGT TCGCTCAGTA CGCCCCGCCG
GAGCGCGCTC CGCAGCAGCC CGCGCCCGCG GACCAGGTGC ACAGCATCCC CACCGTGCCG
CCCTTCCCCG CCGCCGAACC CACGCCCGCG GCGCCGCTGC AGGAGACGCG GCCGGAGGAC
GACGACGTGC ACGAGCAGGA CAGCACGCGC GGCCAGCACT CCTCGGGCAG CACCGTGGCC
GAGCTGATCG CCCGGATGAA CGCCGACACC GAGCGCAGCG GCGGCCGCCG GCGCAAGCCG
GAGTGA
 
Protein sequence
MMDPGNRKRA PRRSNAGAGQ WMLGAVIVLA VAGTGMWIFS DDKRWGLLAL ILLVWGLVIA 
AFLIARNARD IRSAESKESG LKAVYELQLE REISARREYE LQLEHDLRSE LRHESNEELT
ALKAEVLALR ANLEELLGRD LGPSYTELYA AAEQRAIDAQ RAKSVFEDDD RFRAQQDFAG
VPPPVPDVDS YYGAASAVND VPDFPAAAEQ PVDAPSAPNR PQEDTPTAVF EAVVDPQSPA
AAPPVDAEPV DVEHIDHIDG DEPFVPLAPQ SGYRPPFPPR RFTPDAAQQQ PPQFAQYAPP
ERAPQQPAPA DQVHSIPTVP PFPAAEPTPA APLQETRPED DDVHEQDSTR GQHSSGSTVA
ELIARMNADT ERSGGRRRKP E