| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0553 |
|---|
| Symbol | |
|---|
| ID | 9154689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 582051 |
|---|
| End bp | 583421 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- al anine-endopeptidase |
|---|
| Protein accession | YP_003645532 |
|---|
| Protein GI | 296138289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCACGCT CGCGGATCCG ACGAACCCTC GTGCGCCTCG CGGTCACCGT GATCGTGCTG
GCGCTGGTCG TCGTCGGCGT TCTCGCCGCG GCCCTCGGGT ACGCCGCGTA CCGCGACAGC
CGTGACCTCG ACGCGCAGGT ACCGCCCCGC CCGGCCGAGC AGGCCTACAC TCCGGCGATC
GCGCCCGTGG CCGCCACCTC CGCTCCCACC GCGGCGGGAG TGCGCGCACA GATCGCGGCG
GCATTGCAGA ACCCCGACCT CGGCGACTTC ACCGGCGTGA TCGCCGACGC CGCATCGGGC
GGCGTGCTCT GGGAACGCGA CGCAGCCCGG CCCCGCACTC CGGCGTCCAC CACCAAGGTG
CTCACAGCGG CCGCCGCGCT GCTCACTCTG CCGGCCGACA AGCGGATCAC CACCACCGTG
GTCGCCGGCG CACAGCCGGG CGAAGTGGTG TTCGTGGGCG CGGGCGATCC GACGTTGCGC
GCGGGATCCG ATTCGATGTT CACCGATGCT CCCAAGATCT CCGATCTGGC CGCACAGCTG
CGGCGCGGCG GTACCAAGAT CACCCGTGTG GTGGTGGACA CCGCATTGTT CACCGGCCCC
GACTTGGCTC GTGGTTGGGA GCGGGCCGAT ATCGCCGGCG GGGATGTGAC GCCGATGCAA
GCGCTCACCG CAGACGCGGG TCGCATTCGC CCCGGCGAGG ACTACTCGCC GCGCGTCCCC
GATCCCGCCG TATCGGCGGG GCGCGCGCTC GCCACCGCGC TGGGTCTGCC GCCCACCGCC
GTCTCGACCG GGACCGCTCC GTCGGGTGCG GCGCAACTCG CCTCCGTGCG CAGCGCACCG
CTCGATGTGC GGCTGCGCGA CGCCATGATC CACTCGGACA ACGTGCTCGC CGAGTCCATC
GGGCGCGAGG TCGCCGCTGC GGGCGGCCAG CCGCTGTCCT TCGACGGCAG CGCCCGCGCC
GTGACGGCGG CCCTGCGCAA TGCCGGATTC GACCTCACGG GCGTCGAGCT CTCCGATGTC
GACGGCCTCT CCACGCTGAA CCGCATCTCC GCGAAGGTGC TCGACGAGAT CCTCACCGCC
GCAGCCGGGA ACGGCAAGCC GCAGCTGCGT CCGCTGCTCG ATATGCTGCC CGTCGGCGGC
TCCAGCGGAA CGCTCGCCGA CCGGTACGTC ACTGCGAACC GGCCCGGTGC CGGATACGTC
CGCGCCAAGA CCGGCAGCCT CTCCGGCGTC AGTACCCTGT CCGGGTTCGT CGCCGACCGG
GAGGGCTCGA TCATCACCTT CACGCTCATG TCCTCCGGAA CCCCCGTCGA CGTCGCGCGC
CCCGCGATGG ACGCGGTGAC GGCCGCGCTG CGCGGCTGCG GCTGCCGCTG A
|
|---|
| Protein sequence | MPRSRIRRTL VRLAVTVIVL ALVVVGVLAA ALGYAAYRDS RDLDAQVPPR PAEQAYTPAI
APVAATSAPT AAGVRAQIAA ALQNPDLGDF TGVIADAASG GVLWERDAAR PRTPASTTKV
LTAAAALLTL PADKRITTTV VAGAQPGEVV FVGAGDPTLR AGSDSMFTDA PKISDLAAQL
RRGGTKITRV VVDTALFTGP DLARGWERAD IAGGDVTPMQ ALTADAGRIR PGEDYSPRVP
DPAVSAGRAL ATALGLPPTA VSTGTAPSGA AQLASVRSAP LDVRLRDAMI HSDNVLAESI
GREVAAAGGQ PLSFDGSARA VTAALRNAGF DLTGVELSDV DGLSTLNRIS AKVLDEILTA
AAGNGKPQLR PLLDMLPVGG SSGTLADRYV TANRPGAGYV RAKTGSLSGV STLSGFVADR
EGSIITFTLM SSGTPVDVAR PAMDAVTAAL RGCGCR
|
|---|
| |