Gene Tpau_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0541 
Symbol 
ID9154677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp569593 
End bp570171 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645521 
Protein GI296138278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.451413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCGCA CCGTCGACCA TGGCGAACGA CGCTCGGAGC TGACCGACGC CGTGGCTCGC 
ATCGCTGCAC GCGACGGCCT GCAGGCCGTG ACGATGCGAG CGGTCGCGGC GGAGGCGGGA 
GTGTCGCTGC GGCTCGTGCA GTACTACTTT GAGAACAAGC ACGGGTTGCT GATCGGCGCC 
ATGCGGCGAC TGGAGGAGCA GTCGAACGCC CGCTGGCGTG CACGGCTGTC GAATACCGCC 
GATCCGCGAG CGATGTTGCA CGCCTTCATA TCCGAAGCCC TACCAACCGA TCCGGAGAGC 
ACAGACTTCT ATCGGGTCAG CGCCGCATTC GGCGAACTGG CGCGGACGGA TACGGAACTC 
GCCGCCGAAC CCCTCGCTGG CGGGCTCACG CGACTGAGGT CGACGGTTCT CGACACCTTT 
CGCGCCGCCG ACCTCCCGCC CGATGCCGAC CCGGAGGCAG AGACCGACGC GCTGATCTCC 
CTGTGCAACG GCCTCAGCAC CGCAGTGCTA CTCGGCCATC ACACCGCCGA CCGGGCCGTC 
GCGATCGCGA GCTATCACCT CGACCGTGTA TTCCGCTGA
 
Protein sequence
MPRTVDHGER RSELTDAVAR IAARDGLQAV TMRAVAAEAG VSLRLVQYYF ENKHGLLIGA 
MRRLEEQSNA RWRARLSNTA DPRAMLHAFI SEALPTDPES TDFYRVSAAF GELARTDTEL 
AAEPLAGGLT RLRSTVLDTF RAADLPPDAD PEAETDALIS LCNGLSTAVL LGHHTADRAV 
AIASYHLDRV FR