Gene Tpau_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0520 
Symbol 
ID9154656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp549786 
End bp550460 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003645500 
Protein GI296138257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTGC TGGTCGTCGA AGACGAGTTG TTCCTGGCGG AGGCGGTGCG TGATGGCCTA 
CGGCTGGAAG CCATCGCGGC CGACATCGCC GGCGACGGCG ATACCGCGCT CGAAATGCTC 
AGTGTGAACA GCTACGACAT CGCGGTGCTC GACCGCGATA TCCCGGGGCC GTCGGGCGAC 
GAGATCGCCG CCAACATCGT CGCCTCGGGC ACGGGCATGC CGATCCTCAT GTTGACCGCC 
GCCGACCGCC TCGACGACAA GGAGTCCGGG TTCGAGCTGG GTGCCGACGA CTACCTCACC 
AAACCGTTCG AGCTGAGGGA ACTGGTGCTG CGATTGCGCG CCCTGGACCG CCGACGCGCC 
CACAGTCGGC CTCCGGTGCG GGAGATCGCC GGACTGCGCC TGGATCCGTT CCGGCGCGAG 
GTGTTCCGCA ACGGCAAGTA CGTGGCCCTG ACCCGCAAGC AGTTCGCGGT GCTGGAGGTG 
CTGGTGGCCG CGGAGGGCGG CGTGGTCAGC GCCGAGGAAC TGCTCGAACG GGCCTGGGAC 
GAGAACGCCG ATCCGTTCAC CAATGCCGTC CGGATCACCG TGTCGGCGCT CCGCAAGCGC 
CTCGGGGAGC CGGGAATCGT GGCGACGGTG CCGGGGGTCG GCTATCGGAT CGACGCAGGG 
GCCTGTGATG ACTAG
 
Protein sequence
MRVLVVEDEL FLAEAVRDGL RLEAIAADIA GDGDTALEML SVNSYDIAVL DRDIPGPSGD 
EIAANIVASG TGMPILMLTA ADRLDDKESG FELGADDYLT KPFELRELVL RLRALDRRRA 
HSRPPVREIA GLRLDPFRRE VFRNGKYVAL TRKQFAVLEV LVAAEGGVVS AEELLERAWD 
ENADPFTNAV RITVSALRKR LGEPGIVATV PGVGYRIDAG ACDD