Gene Tpau_0485 details

Gene Information

• Locus tag: Tpau_0485
• ID: 9154621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 512096
• End bp: 514141
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 69%
• Product: heavy metal translocating P-type ATPase
• Protein accession: YP_003645465
• Protein GI: 296138222

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAG AACACGACCA CGACTCCGGC CATTCGGCGC GCTGGGAGAT CGGCTTCGCC 
ATCGCCTCGG GCGTCACCTA TGTCAGCGGC ATGATCGCCG AATACGCACT GGACCAGCCG 
TCCGTCGCCA CCTTCTTCTT CCTCGCCACC TACTTCTTCG GCGGCTACTT CACCATCCGT 
TCCGCCATCC AGTCGACCCT CAACGGCAAG TTCGAGGTCG ATTTCCTCAT GCTGGTCGCG 
GCGATCGGCG CCGCTTCCAT CGGCCGCTTC GCCGAGGGCG CGGTCCTGCT GTTCCTGTTC 
AGCCTCGGTC ACGCGCTGGA GGAGTACGCC CTCGCGCGCG CCTCGAAGTC GATCGAAGCT 
CTCGCTGAGC TCGCGCCGCG CACCGCGCTC GTGCATACGG GCGGACCGTC GAACCTGTCC 
GGGGAGTTCG CCGAGAAGTC GGTCGACGAT CTGGAGGTCG GCGATCTCGT GCTGATCCGG 
CCCAACGCGC GGGTCAGCGC CGACGGCTTC GTCGTCGACG GCCGTTCCGC CATCGACCAG 
AGCGCGGTGA CCGGCGAATC GATGCCGGTC GAGAAGGAGC CCGTGGGCAG CCCCGCCGCC 
GCGGCCGCTC GCCCTACCAA TGTGCCTGCC GAGCACCGCG TCTTCGCGGG CACCGTCAAC 
GGCTCCGGCG CCCTGGTGGT GCAGGCCACC GCACTCGCCA AGGACTCCAC GCTGAGCAAG 
GTGGTCGAGC TGGTCGCCTC CACCGACCAG GCGAAATCGC CCACGCAGCG CTTCCTCGAC 
AAGTTCCAGC GCATCTACGT GCCGGCCGTG ATCGCCTTCG TGATCGGCGT CTTCCTGGTG 
GGCTACTTCG CCCTGGGTAA CCCGTTCACC GACGCCTTCT ACCTCGCGAT GGCCGTACTC 
GTCGCCGCGA GCCCGTGCGC CCTGGCGCTC GCCACCCCGT CGGCGGTGCT CGCCGGAGTG 
GCCCGCGCGG CCCGCGCCGG CGTGCTGATC AAGGGCGGTG CACCGCTCGA GACGCTGGGC 
CGGGTCTCGT CGATCGCCTT CGACAAGACC GGCACGCTCA CCTGGGGCGA GCCGCAGGTC 
ACCGACACCG TCGCGGCACC CGGCGTCGAC CTCGACGATC TGCTCGCCAC CACCCTGGCC 
GTCGAGAAGC TCTCCGACCA CCCCCTCGCC GCCGCCGTCA CCGATGGCAT CGCGAACCGC 
ACCTCGACCG TGCTCACCGC GACCGATCTG CAGTCCGTGA CCGGACGCGG CGTGCGCGCC 
ACCATCGATG GTGACGCGGT GGAGATCGGC AACGCGCGAC TGTTCACCGA CGCCGATATC 
GCCCTCGACG AGGTCGCCGC CGATATCGAC CGCCTGCAGG CGGCGGGTCG CACACTGATG 
ATCGTGCGCC GCGGCGGCCG CTTCCTCGGC GTCATCGGCG TGATGGACAC TCCGCGCCGT 
GAGGCCGGCG AGGTGCTCGA TCGGCTGCGC GAATCGGGCA TGACCGACAT CGTGATGATC 
TCCGGCGATC ACCAGCAGGT GGCCGACGCC GTCGGCAAGG AGGTGGGCGT CGACCGTGCT 
CTTGGCGGAC TGCTGCCCGA GGACAAGGTC ACCCAGATCC GCGACATGTC GGGGAGCAAG 
GAGGAGCCCG CCGGTACCAG CGGTCGACGG TGCGCCATGG TGGGCGACGG CGTCAACGAC 
GCGCCCGCGA TGGCCCAGGC CGATGTCGGG ATCGCCATGG GCGCAGCCGG TTCCGCCGTC 
GCTCTGGAGA CCGCGGATGT CGCGCTGATG AGTGACGACC TGGGTCGGCT GCCCTTCGCG 
GTGCGGCTGA GCCGGCAGAC CAGCCGGATC ATCCGGCAGA ACCTGATCGC CTCGCTGGGC 
ATCGTGGTCT TCCTGATCAT CGTGACCTTC CTCGGGATGC CGATGGGCCC GGTGGTGTTC 
ATCCACGAGG GGTCGACCCT GATCGTTGTC GCCAACGCAC TGCGGCTGCT CCGCTTCGAC 
GTGGGCAAGG AGCATGACGG CGTCGAGCAC GAGGCGCGTC CGGAGAAGGT GCCCGCAGCC 
GCCTGA 

 

Protein sequence

MSAEHDHDSG HSARWEIGFA IASGVTYVSG MIAEYALDQP SVATFFFLAT YFFGGYFTIR 
SAIQSTLNGK FEVDFLMLVA AIGAASIGRF AEGAVLLFLF SLGHALEEYA LARASKSIEA 
LAELAPRTAL VHTGGPSNLS GEFAEKSVDD LEVGDLVLIR PNARVSADGF VVDGRSAIDQ 
SAVTGESMPV EKEPVGSPAA AAARPTNVPA EHRVFAGTVN GSGALVVQAT ALAKDSTLSK 
VVELVASTDQ AKSPTQRFLD KFQRIYVPAV IAFVIGVFLV GYFALGNPFT DAFYLAMAVL 
VAASPCALAL ATPSAVLAGV ARAARAGVLI KGGAPLETLG RVSSIAFDKT GTLTWGEPQV 
TDTVAAPGVD LDDLLATTLA VEKLSDHPLA AAVTDGIANR TSTVLTATDL QSVTGRGVRA 
TIDGDAVEIG NARLFTDADI ALDEVAADID RLQAAGRTLM IVRRGGRFLG VIGVMDTPRR 
EAGEVLDRLR ESGMTDIVMI SGDHQQVADA VGKEVGVDRA LGGLLPEDKV TQIRDMSGSK 
EEPAGTSGRR CAMVGDGVND APAMAQADVG IAMGAAGSAV ALETADVALM SDDLGRLPFA 
VRLSRQTSRI IRQNLIASLG IVVFLIIVTF LGMPMGPVVF IHEGSTLIVV ANALRLLRFD 
VGKEHDGVEH EARPEKVPAA A