| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0458 |
|---|
| Symbol | |
|---|
| ID | 9154594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 482836 |
|---|
| End bp | 484209 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003645438 |
|---|
| Protein GI | 296138195 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.518173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACG CACCCCTCCG TCGCGGACTC ACCGCCCGGC ACATCCGGTT CATCGCGCTG
GGCTCGGCCA TCGGCACCGG CCTGTTCTAC GGGTCGGCGA AGGCCATCCA GGCGGCCGGG
CCATCGGTAC TGCTGGCCTA TGTGATCGGC GGCCTGGTGA TCTACCTGGT GCTGCGGGCG
CTGGGCGAGA TGGCGGTGCG CAATCCGCAG GGCTCGTTCG GCGACTACGC CTCGTCGAGC
CTGGGGCCGC GGGCCGGGTT CATGACGGGG TGGATGTACG TCTTCGAGAT GGTCTTCGTG
TGCATCGCCG ACGTCACCGC GTTCGGCACG TACATGGGGC TGTGGTTCCC GCACGTGCCG
AAGTGGATCT GGGTACTCGC CGTGATCCTG TTCATCGGCG CACTGAACAT GATGCGCGTC
AAGGTGTTCG GCGAGGTCGA GTTCTGGCTG ACGATGGTGA AGATCACCGC GATCGTCGCC
ATGATCTTCG GCGGCATCGC GGTGCTGATC TTCGGCTTCG GCATGCACGA CACCAGCCGG
GGCGTGAGCA ATCTGTGGGG CGACGGCGGC TTCTTCGCCA CCGGCTTCCT CGGCTTCCTG
TCCTGCTTCG TGCTGGTGGT GTTCGCCTTC GGCGGCTCGG AGATCATCGG GCTCACCGCC
GCGGAGGCAG AAGATCCCGA GCGCACGATC CCCAAGGCGA TCAACACGGT GCCGGTGCGT
ATCGGCCTGT TCTACGTGCT GGCGCTGGCC GTCATCATGG CGGTGATCCC GTGGAACCAG
ATCAGCAGCG AGTCGAGCCC GTTCGTCCAG ATCTTCCAGG CACTCGGCGT GGAGCCCGCC
GCTCACGTGC TCAACGTCGT GGTGATCACC GCGGCGATCT CGGCCATCAA CAGCGATATC
TACGGCGCCG GCCGGATGAT GTTCGGCATG GCTCAGCGCG GGCAGGCGCC CACAATCATG
CAGAAGGTCT CCCGTAACGG CGTTCCCTGG ATGACGGTGG TGATCATGGC CGCCGCGCTG
CTGGTGGGCG TGGTGCTCAA CGCCGCCATC CCGGAGAACG TGTTCGTGGT GATCGCGTCG
ATCGCCACCT TCGCGACGGT CTTCGTGTGG CTGATGATCC TGTTCTCGCA ATACCGCCAG
CGCACGGCGA TGTCCGCCGA TGAGCAGTCG GCGCTGACGT TCCCCGTGCC GCTGTGGCCC
TACGGCCAGC TGATCGCCAT CGCGTTCCTA CTGTTCGTCA CGGTGCTGAT GGCGTTCCAG
CCGGACACCC GGGTGGCGCT GATCGTCGGG TTCGTGTGGC TCGCCTTCCT CGCCGCCGCA
TACGCCGTGT GGGTGGCGCC GAAGGCCGCA GTGCGGTCCG GTTCGGAGCG TTAG
|
|---|
| Protein sequence | MTDAPLRRGL TARHIRFIAL GSAIGTGLFY GSAKAIQAAG PSVLLAYVIG GLVIYLVLRA
LGEMAVRNPQ GSFGDYASSS LGPRAGFMTG WMYVFEMVFV CIADVTAFGT YMGLWFPHVP
KWIWVLAVIL FIGALNMMRV KVFGEVEFWL TMVKITAIVA MIFGGIAVLI FGFGMHDTSR
GVSNLWGDGG FFATGFLGFL SCFVLVVFAF GGSEIIGLTA AEAEDPERTI PKAINTVPVR
IGLFYVLALA VIMAVIPWNQ ISSESSPFVQ IFQALGVEPA AHVLNVVVIT AAISAINSDI
YGAGRMMFGM AQRGQAPTIM QKVSRNGVPW MTVVIMAAAL LVGVVLNAAI PENVFVVIAS
IATFATVFVW LMILFSQYRQ RTAMSADEQS ALTFPVPLWP YGQLIAIAFL LFVTVLMAFQ
PDTRVALIVG FVWLAFLAAA YAVWVAPKAA VRSGSER
|
|---|
| |