| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0444 |
|---|
| Symbol | |
|---|
| ID | 9154579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 467787 |
|---|
| End bp | 469415 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003645424 |
|---|
| Protein GI | 296138181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG GTGAGCTGAG CATCGCTCGG CTCGTCGAGT ACAGCCGCCG CGTCTTCCCC
GAGGCCAGGA TCACCACGTG GACCGGCACC GAGCTTCGCG ACGCCTCGTT CGCCGAGATC
GGTGACAGGG CGGCCCAGCT GGCGCACGCG CTCACCAAGC TGGGCGTGCA GCGCGGCGAC
CGCGTGGCCA CGTTCATGTG GAACAACAAT GAGCACCAGG TCGCGTACGC GGGCGTACCC
GCGATGGGCG CGGTGTTGCA CACGCTGAAC CTGCGCCTCT CGCCCGAGCA GGCCGTCTTC
ATCATCAAGC AGGCCGACGA CAAGGTGATC CTGGTGGATG CCTCCGTCGC TCCGTTGCTC
TCGAAGTACA TCGCCGCCAC CCCGAACGTG CAGCACGTGA TCGTGACGAA CGGCCCGAAG
GAGGCGCTGG AGGCGCCCGA GGGCATCACC GTGCACAGCC TGGACGAGCT GCTGGACGGC
GAGCCGACCA CGTTCGACTG GCCCGAGATC GATGAGCGCG ACCCCGCGGT CATGTGTTAC
ACCTCGGGCA CCACGGGCGA CCCCAAGGGC GTGGTCTACA GCCACCGCAG CATCTGGCTG
CATTCGATGC AGGTCAACTC CAGCTCGGGC ATGTCCCTGG GCAACGCGGA CTCGGTGCTC
GCCATCGTCC CGATGTTCCA CGTGATGTCG TGGGGCCTGC CGTACGCCGC GATGATGGGC
GGCATCACCC TGGTGATGCC CGACCGCTTC CTGCAGCCCG AGCCGCTGCT GCAGATCATG
GCCGCCGCGA AGCCCACCTT CGCCGCGGCC GTGCCCACCA TCTGGCAGGG CGTGGCCGCG
CAGCTCGCCG TGACGCCCCA GGACATCTCG CACCTGCGCG AGGTGGTTGT GGGCGGTGCC
GCCGTGCCGC CGTCGATGAT CCGGGCCTTC GATAAGCTGG GCACCCGGAT CGTGCATGCC
TGGGGTATGA CCGAGACATC GCCGCTGGGC TCGGTCTCGC GTCCGCCGTT CGGCATCGAG
GATGACGACA GGGAGTTCGC CTACCGGGTG ACGCAGGGCC GCTTCCCGGC CTCGGTGCAG
GCCCGGCTGA TCGACGACGA GGGCAATGAG CAGCCCTGGG ACGGCGAGTC CTCCGGCGAG
CTCGAGGCGC GCGGTCCCTG GATCACCGGC GCCTACTATT CCCCCGAGGG AAATGTGGTG
GACGAGTCCA AGTTCCACGA CGGTTGGTTG CGGACCGGTG ACGTCGCAAG CATCAGCCCC
GACGGCTTCA TGACCATCCG TGATCGCACC AAGGACATGA TCAAGACCGG TGGCGAGTGG
ATCAGCTCCG TCGAGCTGGA GAACACCGTG ATGAGCAACC CGACGATCGC CGAGGCCGCC
GTCGTGGGCG TGCCCGACGA GAAGTGGGAC GAGCGTCCGT TCGTGCTCGC CGTGGTCAAA
GACCCGGCCG ACGCCGACAT CGAGAAGCAG CGTGCGTACC TCACGGACCT GTTGCCCAAG
TGGCAGATCC CGGAGCGCTG GGCATTCGTG ACCGAGGTGC CGAAAACCTC GGTCGGCAAG
TTCGACAAGA AGGTCATCCG CGCCGAATAC GCCGACGGCA CCTACCCGGT GGTCGACGCG
CGCGCCTGA
|
|---|
| Protein sequence | MQDGELSIAR LVEYSRRVFP EARITTWTGT ELRDASFAEI GDRAAQLAHA LTKLGVQRGD
RVATFMWNNN EHQVAYAGVP AMGAVLHTLN LRLSPEQAVF IIKQADDKVI LVDASVAPLL
SKYIAATPNV QHVIVTNGPK EALEAPEGIT VHSLDELLDG EPTTFDWPEI DERDPAVMCY
TSGTTGDPKG VVYSHRSIWL HSMQVNSSSG MSLGNADSVL AIVPMFHVMS WGLPYAAMMG
GITLVMPDRF LQPEPLLQIM AAAKPTFAAA VPTIWQGVAA QLAVTPQDIS HLREVVVGGA
AVPPSMIRAF DKLGTRIVHA WGMTETSPLG SVSRPPFGIE DDDREFAYRV TQGRFPASVQ
ARLIDDEGNE QPWDGESSGE LEARGPWITG AYYSPEGNVV DESKFHDGWL RTGDVASISP
DGFMTIRDRT KDMIKTGGEW ISSVELENTV MSNPTIAEAA VVGVPDEKWD ERPFVLAVVK
DPADADIEKQ RAYLTDLLPK WQIPERWAFV TEVPKTSVGK FDKKVIRAEY ADGTYPVVDA
RA
|
|---|
| |