Gene Tpau_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0439 
Symbol 
ID9154574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp463433 
End bp463975 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645419 
Protein GI296138176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCCCC CTCCCGCCGC CCGCGCCAAA CTGCTCGATG CCTATGTGCG CATCCTGATC 
GAACAGGGCG AACGTGCCGC GACCCTCGAG GCCGTGGCCG CCGAGGCCGG CGTCAGTAAG 
GGCGGTCTGC TGTACCACTT CGGTTCTAAG GACGCCCTGG TCGAGGGACT GATCGGCCGG 
CTGAACGAGC TGGTCGAACA GGACGTCGAG CTGATGCGCG CAGCTCCCGA GGGCGCCGTG 
GACTACTACG TCCGCACCTC GAACTACGCC GATACGCCGC TCGATCGGAC CATCGTCGCC 
GTGCTGCGGC TGAGCCAGGT GGCCAACACT CGTGCCCAGG AGGCGATCCA GGCCATGCAG 
CAGCGCTGGC TGGAGACGCT CGTCGAGCAG GTGCCCGACG AGGCCGCCGC GCGCGCGGTA 
ATCCTCATGG GCGACGGGCT GTACTACAAC GCCGCCCTCA GCGGCGGCCG GCATGTGGCC 
ACCGACGAAC AGATCGAGGA GCTGCTTGCG CTGGTGCGGC ACATGCTCGA CGCCCCGCGG 
TAA
 
Protein sequence
MPPPPAARAK LLDAYVRILI EQGERAATLE AVAAEAGVSK GGLLYHFGSK DALVEGLIGR 
LNELVEQDVE LMRAAPEGAV DYYVRTSNYA DTPLDRTIVA VLRLSQVANT RAQEAIQAMQ 
QRWLETLVEQ VPDEAAARAV ILMGDGLYYN AALSGGRHVA TDEQIEELLA LVRHMLDAPR