Gene Tpau_0432 details

Gene Information

• Locus tag: Tpau_0432
• ID: 9154567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 453967
• End bp: 455967
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 67%
• Product: YhgE/Pip C-terminal domain protein
• Protein accession: YP_003645412
• Protein GI: 296138169

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.347032
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA AGAAGTCCCC GAAGCGGAGC AACACCGTTC CGATCGCCGC CGGCCTCGCC 
TTCGGCTCCG AGATCAAGCG CTTCGGCCGC AGCCGGATGA CGCGCGCCGC GATCGTGGTG 
CTCATGCTGC TGCCGCTGGT GTACGGCGCG CTGTACCTGT GGGCCTTCTG GGACCCGTTC 
GGCAACGTCA ACAAGATGCC GGTGGCGCTG GTGAACGCCG ACAAGGGCAC TATCGTCAAG 
GATCAGAAGA TCAACGCGGG CGCCGAGGTC GAGAAGTCGC TCAAGGACGA CAAGAGCCTG 
GACTGGAACA TCGTCTCGCC GGCGGAGGCG CGGCAGGGAG TCAAGGACGG CACGTACTAC 
TTCATGCTGG AGCTGCCGGA GAACTTCTCC TCGGCGATCG CCTCGCCGAT GACGGGGAAG 
CCCGAGAAGG CGCAGCTGCG GGCCGTCTAC AACGATGCCA ACAACTACAT CAGCTCGACC 
ATCGGACAGA CCGCGATGGC GCAGGTGCTC AACGCGGTCT CGACCAGGGT GTCCGGGCAG 
GCCGTCAACC AGGTGCTGTC CATGATGATC ACGGCCGGAG CGGGGATCGA GCAGGCCGCC 
GACGGGGCGG GGAAGCTGGC CGACGGGCTG GTGACCGCGA ACGACGGTGC CGCCAAGCTC 
GCCGACGGCC TGGCGACTGC GAAAACGGGA TCGGCCCAGT TGAAGACGGG GTCGCAGCAG 
CTCTCGGACG GCATCAACCA GGCCACCGAT CCGATCCTCG CGGTGACTCG TGCGCTCTCC 
GGCCTGGGTG GGAACACCGC CGAGTTGCAG CAGAGCGCTA CGGCATTGGT CGAGGCCGCC 
GATAAGGCCG GGGTGTTCGT CAAGACGCAG GACACGGCGC TCGCCGGTAT CGATGCCGCG 
ATCCGTCAGC TCGCCGCGAG CCCCGACCCA GCTGCCCGAC AGGCCGCGGA CGGCCTACGC 
GCGATACGCG GGCAGCTGGC CCAGGCGTCG GTGACCGAGC AGACGAAACA GCAGATCATC 
GCCGCCCAGA ACGGGGCGAT CGCGCTCACC GAACAGCTGC GCACCCCGGG CAGCCCGCTC 
CAGACCGTAC TGTCGAAGGT GGGCGGCACG GGCGACGATC TGACCGCCAA GCTCACCCAG 
TTGCGCGACG GTGCCGCCCA GGTGGCCGCC GGTAACGCCC AGCTGGACAA CGGCATCACG 
CAGCTCTCGT CGGGCGCCGG CCAGCTCGCA ACGGGCACCG TGCAACTGAA GGACGGCAGC 
CGGGAGCTCG CGACGAAGCT CGGGGAAGGG GCGCAGTCCG TCCCGAAGTG GTCGCAGGAG 
CAGACCTCCC AGGTGGCTTC GACCATCGGC GGCCCGGTGC AGCTCGACTC GACGCACGAG 
AACCGGGCCC CGAACTTCGG TACCGGTATG GCGCCGTTCT TCCTCACGCT CGCATTGTTC 
TTCGGGGCGC TCGTGCTGTG GATGGTGTTC CGGCCCTTGC AGAACCGCGC CATCGCGGCG 
GAGGTGCTGG CGATCCGGGT GGTGATGGCG AGCTATCTCC CGGCGGCGGC GATCGCGCTG 
TGCCAGGCCG TGATCCTGTA CTGCGTGGTG CGGTTCGCCC TCGGACTGGA GGTCGCCCAC 
CCGGTGGGCA TGTTCTTGTT CATGTTGGGC GTCTCCCTCG CCTTCGTGGC GTTCACCCAG 
GCGGTGAACG CCCTCGTGGG GCCGGCGGTG GGCCGCGTGC TGATCATGGC GCTGCTCATG 
CTGCAACTGG TGAGTTCCGG CGGCATGTAT CCGGTGGAGA CCACCGCCCG ACCCTTCCAG 
GTGCTGCACA AGTACGACCC GATGACCTAT GGCGTGAATG GATTGCGCCA GTTGGTCTCC 
GGCGGAATCG ACCACCGGCT CTGGCAGGCG GTCGCCGTGT TGGTGTTCCT GTGGGTCGTC 
TCCGTGACCG TCTCGTGCCT CTCCGCGAGA CGGAACCGGT TGTGGAACCT CGACCGGTTG 
ATGCCCGCGA TCAAGATCTG A 

 

Protein sequence

MSDKKSPKRS NTVPIAAGLA FGSEIKRFGR SRMTRAAIVV LMLLPLVYGA LYLWAFWDPF 
GNVNKMPVAL VNADKGTIVK DQKINAGAEV EKSLKDDKSL DWNIVSPAEA RQGVKDGTYY 
FMLELPENFS SAIASPMTGK PEKAQLRAVY NDANNYISST IGQTAMAQVL NAVSTRVSGQ 
AVNQVLSMMI TAGAGIEQAA DGAGKLADGL VTANDGAAKL ADGLATAKTG SAQLKTGSQQ 
LSDGINQATD PILAVTRALS GLGGNTAELQ QSATALVEAA DKAGVFVKTQ DTALAGIDAA 
IRQLAASPDP AARQAADGLR AIRGQLAQAS VTEQTKQQII AAQNGAIALT EQLRTPGSPL 
QTVLSKVGGT GDDLTAKLTQ LRDGAAQVAA GNAQLDNGIT QLSSGAGQLA TGTVQLKDGS 
RELATKLGEG AQSVPKWSQE QTSQVASTIG GPVQLDSTHE NRAPNFGTGM APFFLTLALF 
FGALVLWMVF RPLQNRAIAA EVLAIRVVMA SYLPAAAIAL CQAVILYCVV RFALGLEVAH 
PVGMFLFMLG VSLAFVAFTQ AVNALVGPAV GRVLIMALLM LQLVSSGGMY PVETTARPFQ 
VLHKYDPMTY GVNGLRQLVS GGIDHRLWQA VAVLVFLWVV SVTVSCLSAR RNRLWNLDRL 
MPAIKI