| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0427 |
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| Symbol | |
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| ID | 9154562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 449152 |
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| End bp | 450510 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003645407 |
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| Protein GI | 296138164 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.412376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATG CACCCAGCAC AGACTTCTAC GCAGCGTTCG TGAAGTCGGG CCCCGGCTCC
TTCCTGGCCA GCCGTCTCGG CCTCCCGCAG CCCCCGTCGC TGCGCCGCTA CCAGCCCGGT
AAGCCCGCCC TCGCCGGCCC CGTCCTGCTC GGCGGCAGCG GCCGCCTGGT CGAGCCGGTG
CGCGAGCTGC TCGCCGACTA CGACCTGGTG GTCAACAACG GCGGCGCCCG CGGCGCCGAG
AAGCTCGGTG GCGCCGTCTT CGATGCCACC GGCATCACCT CCATCGACGA TCTCAAGGGC
TTGTACGAGT TCTTCGGCCC GCAGATCCGC TCGCTGGGCA ACAGCGCCCG CATCGTGGTG
CTGGGCACCA CGCCCGAGCT GATCGAGGAT ATCGACGAGC ACATCGTCCA GCGCGCCCTC
GAGGGCTTCA CCCGCTCGGT GGCCAAGGAG CTGCGTGACG GTGCCACCGC CCAGCTGGTG
TACGTGCACC CGAAGGCCTC GACCGGCGCC TCCGGCCTGG CCTCGACGCT GCGTTTCCTG
CTCTCGGGTA AGTCGGCGTA CGTCGACGCG CAGGTCATCC GGATCACCGA CAAGGACGCC
GAAGCGCCCG CCGACTGGGA CAAGCCGCTC GCCGGCAAGG TCGCCCTCGT GACCGGTGCC
GCCCGAGGCA TCGGCGCCAC GATCGCCGAG GTGCTCTCGC GCGACGGTGC GCATGTGATC
GCCGCCGATA TCCCCGCCGC CGGCGAGGCC CTGTCCGAGG TCGCCAACAA GGTGGGCGGC
ACCGCGCTGC CGCTCGACGT GACCGCCCCC GATGCGGGCG CGAAGATCGC CGAGCTGGTC
AAGTCCCGCC ACAGCGGCCT CGACATCGTG GTCAACAACG CCGGCATCAC CCGCGACAAG
CTGCTGGCCA ACATGGACGA GGGCAAGTGG AACTCGGTCA TGGCCGTCAA TCTCAAGGCC
CCGAAGCAGC TGGTGGACGA CCTGCTCGCC GCCGGTGCGC TGAACGAGGG CGGCTCCGTG
GTCGATGTCT CGTCGATCGC CGGTATCGCC GGTAACCGCG GACAGACCAA CTACGGCGCT
ACCAAGGCCG GCGTGATCGG CATCGTCGAT GCGTACACCT CGGTGCTCGC GGAGAAGAAC
ATCACCATCA ACGCCGTGGC CCCCGGTTTC ATCGAGACCG CGATGACCGC CGCGATCCCC
CTGGCAACCC GCCAGGCCGG CCGACTGATG AACTCGCTGC AGCAGGGCGG CCAGACCGTC
GACGTCGCGG AGACCATCTC GTACTTCGCC GCGCCCGCGT CGGCAGCCGT GACCGGCAAC
GTCGTGCGCG TGTGCGGTCA GAGCCTGCTG GGAGCCTGA
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| Protein sequence | MPDAPSTDFY AAFVKSGPGS FLASRLGLPQ PPSLRRYQPG KPALAGPVLL GGSGRLVEPV
RELLADYDLV VNNGGARGAE KLGGAVFDAT GITSIDDLKG LYEFFGPQIR SLGNSARIVV
LGTTPELIED IDEHIVQRAL EGFTRSVAKE LRDGATAQLV YVHPKASTGA SGLASTLRFL
LSGKSAYVDA QVIRITDKDA EAPADWDKPL AGKVALVTGA ARGIGATIAE VLSRDGAHVI
AADIPAAGEA LSEVANKVGG TALPLDVTAP DAGAKIAELV KSRHSGLDIV VNNAGITRDK
LLANMDEGKW NSVMAVNLKA PKQLVDDLLA AGALNEGGSV VDVSSIAGIA GNRGQTNYGA
TKAGVIGIVD AYTSVLAEKN ITINAVAPGF IETAMTAAIP LATRQAGRLM NSLQQGGQTV
DVAETISYFA APASAAVTGN VVRVCGQSLL GA
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