| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0423 |
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| Symbol | |
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| ID | 9154558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 446268 |
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| End bp | 447431 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003645403 |
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| Protein GI | 296138160 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.14537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAT TGTTTCGAAA CCTCACGGTC ATGGTGATCG CCGCGGCGGG TGTCGCCGCG
TGCGGCACAT CCTCCGGACC GGACGCCCCC ACGTCGGTAA CGTCCGCGGT ACCCGCACCG
AACAGCTCCA CGGCATCGTC CTCGGCCGCA GCTCGCCCAG TGAGCTGCGA GATCGACTAC
CTGAGCAAGC TCAGCGTGCG GGAGAAGGTG GCCCAGCTGC TCATGGTGGG GGTCAAGGAT
GCCGCCGACG CTCGCCGTGC GGTACAGCAG TACGGCGTCG GCGGCATTTT CGTGGGCAGC
TGGACGGACA AGTCGATCTT CGCCGGTGGT GCGCTCAAAC AAGTCTCGGC CGCGGGCAAG
GTGCCGCTCA TGGTGTCGGT CGACGAGGAG GGCGGCCGAG TATCCCGGGT GCCCGGCGCG
AACCTGGTCT CCGCACGCCA ACTCGCGAAG ACCAAGACGG TCGAGCAGGC GCGGGCCGAA
GGCAAGCGAG TGGGCGCCCT GATGGCGTCG ATGGGGATCA CCGTCGACTT CGCGCCCGAT
GCGGATGTCT CTGCGCAGCT AGCTGATTCG GTGATCGGCG ACCGCTCCTA CTCCGACGAC
CCCGCCGTGG TGACCAAATA CGCCAAGGCC TTCGCGGCCG GGCTGCGTGA TGGCGGCGTC
TACCCGGTGT ACAAGCACTT CCCGGGCCAC GGACACTCCT CCGGGGATTC GCATCAGGGC
GGGGTGAGTG TGCCGCCGCT GGCGGAGCTG AAGAAGAAGG ACCTGGTGCC CTTCCGCGCC
GCCGCGACCG ACGACGCCGG AATCATGGTG GGGCACCTCA CGGTGCCCGG TCTCACCGAG
AAGGGCACAC CCACCAGCCT CAGCCCGAAC ACGATGCGGT TGCTGCGCGA CGGTGCCGGA
TACGGTGCCG CCCCGTTCGC CGGCCCGATC TTCACCGACG ATCTGTCCGG GATGAAGGCC
GTCACCGACA CCTTCACGGT GCCGCAGGCC GTGACGAAGG CCCTGGTGGC AGGTGCTGAC
GTGGCCCTCT GGATCTCCAC CGACCAACTC GGTGCGGCCG TCGCGCAGGT CGAGGCGGCG
GTGCGGGCGG GCACGCTGCC GATGCAGCGG CTCGACGCCT CAGTGCTGCG GGTGGCGCGC
GCGAAGCATG CGGTGCGCTG CTGA
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| Protein sequence | MMRLFRNLTV MVIAAAGVAA CGTSSGPDAP TSVTSAVPAP NSSTASSSAA ARPVSCEIDY
LSKLSVREKV AQLLMVGVKD AADARRAVQQ YGVGGIFVGS WTDKSIFAGG ALKQVSAAGK
VPLMVSVDEE GGRVSRVPGA NLVSARQLAK TKTVEQARAE GKRVGALMAS MGITVDFAPD
ADVSAQLADS VIGDRSYSDD PAVVTKYAKA FAAGLRDGGV YPVYKHFPGH GHSSGDSHQG
GVSVPPLAEL KKKDLVPFRA AATDDAGIMV GHLTVPGLTE KGTPTSLSPN TMRLLRDGAG
YGAAPFAGPI FTDDLSGMKA VTDTFTVPQA VTKALVAGAD VALWISTDQL GAAVAQVEAA
VRAGTLPMQR LDASVLRVAR AKHAVRC
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